G473018


Basic Information

Item Value
gene id G473018
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 11173177 ~ 11173692 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU537771
TCCACCAGCACTAATCCCTTTTCCTCAGGACTTGGTCCCTCTGGGTCCAGTCCACTAGTATGAATCCCTTTTCCTCAGGACTTGGTCCCTCTGGGTCCAGTCCACCAGTACTAATCCCTTTTCCTCAGGTCTTGGTCCCTCTGGGTCCAGTCCACCAGTACTAATCCCTTTTCCTCAGGACTTGGTCCCTCTGGGTCCAGTCCACTAGTATGAATCCCTTTTCCTCAGGTCTTGGTCCCTCTGGGTCCAGTCCACCAGTACTAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU537771 True 266 lncRNA 0.53 2 11173177 11173692

Neighbor

gene id symbol gene type direction distance location
LOC110525250 hpgds coding upstream 664048 10497758 ~ 10509129 (+)
prf1.5 LOC106585834 coding upstream 688842 10480130 ~ 10484335 (+)
mpeg1.1 mpeg1 coding upstream 693957 10476333 ~ 10479220 (+)
LOC110525245 LOC106585833 coding upstream 712532 10459637 ~ 10460645 (+)
aptx LOC100136186 coding upstream 786832 10384908 ~ 10386345 (+)
LOC110525261 ap3s1 coding downstream 364585 11538277 ~ 11561607 (+)
commd10 comda coding downstream 388775 11562467 ~ 11604688 (+)
LOC118965115 NA coding downstream 570977 11744669 ~ 11744803 (+)
LOC110525262 dmxl1 coding downstream 572321 11746013 ~ 11809089 (+)
LOC110525265 LOC106585816 coding downstream 650667 11824359 ~ 11837872 (+)
G472811 NA non-coding upstream 343492 10824581 ~ 10829685 (+)
G472800 NA non-coding upstream 366835 10806024 ~ 10806342 (+)
G472725 NA non-coding upstream 513616 10657951 ~ 10659561 (+)
G472724 grid2 non-coding upstream 514380 10654937 ~ 10658797 (+)
G472675 NA non-coding upstream 585938 10585311 ~ 10587239 (+)
G473046 NA non-coding downstream 48501 11222193 ~ 11223024 (+)
G473047 NA non-coding downstream 55797 11229489 ~ 11285481 (+)
G473073 NA non-coding downstream 124395 11298087 ~ 11298317 (+)
G473076 NA non-coding downstream 128981 11302673 ~ 11302944 (+)
G473077 NA non-coding downstream 130197 11303889 ~ 11304094 (+)
G472364 NA other upstream 892054 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 1899224 9228570 ~ 9273994 (+)
G470770 NA other upstream 1947664 9223351 ~ 9225513 (+)
G470599 NA other upstream 2362234 8809973 ~ 8810943 (+)
G470292 NA other upstream 2955903 8213280 ~ 8217274 (+)
G473070 NA other downstream 104646 11278338 ~ 11279265 (+)
G474321 NA other downstream 1014596 12188288 ~ 12190572 (+)
G474851 NA other downstream 1330068 12503760 ~ 12504119 (+)
G474949 NA other downstream 1538614 12712306 ~ 12713298 (+)
G475692 NA other downstream 2139987 13313679 ~ 13313969 (+)

Expression


Co-expression Network