G473173


Basic Information

Item Value
gene id G473173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 11457492 ~ 11457723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU537959
TTTTCCTCGTGGAGAAAGCTCCCATTTCTGCCAAagataatacattaaaaaaacactTTAGTAAATACTACCCATTCacatatcccaatttgtgccacccataagtgagtATAGTCCATATATTgagttccctacaggttatagtaaagagcagaagctctgaactatacgttcagaccccagtcctacctaccgaCATACCTACAGCCTCAGTCCAGACCCTTCGCACCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU537959 True 232 lncRNA 0.42 1 11457492 11457723

Neighbor

gene id symbol gene type direction distance location
LOC110525250 hpgds coding upstream 948363 10497758 ~ 10509129 (+)
prf1.5 LOC106585834 coding upstream 973157 10480130 ~ 10484335 (+)
mpeg1.1 mpeg1 coding upstream 978272 10476333 ~ 10479220 (+)
LOC110525245 LOC106585833 coding upstream 996847 10459637 ~ 10460645 (+)
aptx LOC100136186 coding upstream 1071147 10384908 ~ 10386345 (+)
LOC110525261 ap3s1 coding downstream 80554 11538277 ~ 11561607 (+)
commd10 comda coding downstream 104744 11562467 ~ 11604688 (+)
LOC118965115 NA coding downstream 286946 11744669 ~ 11744803 (+)
LOC110525262 dmxl1 coding downstream 288290 11746013 ~ 11809089 (+)
LOC110525265 LOC106585816 coding downstream 366636 11824359 ~ 11837872 (+)
G473167 NA non-coding upstream 10868 11445117 ~ 11446624 (+)
G473158 pggt1b non-coding upstream 16970 11430163 ~ 11440522 (+)
G473155 NA non-coding upstream 28189 11426291 ~ 11429303 (+)
G473123 NA non-coding upstream 35835 11373194 ~ 11421657 (+)
G473150 trim36 non-coding upstream 41131 11409917 ~ 11416361 (+)
G473175 NA non-coding downstream 1328 11459051 ~ 11459276 (+)
G473176 NA non-coding downstream 2167 11459890 ~ 11460091 (+)
G473177 NA non-coding downstream 2922 11460645 ~ 11460941 (+)
G473702 NA non-coding downstream 13019 11470742 ~ 11475365 (+)
G473709 NA non-coding downstream 20603 11478326 ~ 11478543 (+)
G473070 NA other upstream 178227 11278338 ~ 11279265 (+)
G472364 NA other upstream 1176369 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 2183539 9228570 ~ 9273994 (+)
G470770 NA other upstream 2231979 9223351 ~ 9225513 (+)
G470599 NA other upstream 2646549 8809973 ~ 8810943 (+)
G474321 NA other downstream 730565 12188288 ~ 12190572 (+)
G474851 NA other downstream 1046037 12503760 ~ 12504119 (+)
G474949 NA other downstream 1254583 12712306 ~ 12713298 (+)
G475692 NA other downstream 1855956 13313679 ~ 13313969 (+)
G476234 NA other downstream 2527117 13984840 ~ 13985259 (+)

Expression


Co-expression Network