G473175


Basic Information

Item Value
gene id G473175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 11459051 ~ 11459276 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU537961
TAGGAAGACTCTAGAAGTAGCTTAACGCTGCCTGAGGAAGACTCTAGTAGTAGCTTAACGCTGCCTGAGGAAGACTCTAGTAGTAGCTTAACGCTGCCTGAGGAAGACTCTAGTAGTAGCTTAACGCTGCCTGAGGAAGACTCTAGTAGTATCTTAACGCTGTCTTAGGAAGACTCTAGTAGTAGCTTAACACTGTCTTAGGAAGACTCTAGTAGTAGCTTAACGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU537961 True 226 lncRNA 0.45 1 11459051 11459276

Neighbor

gene id symbol gene type direction distance location
LOC110525250 hpgds coding upstream 949922 10497758 ~ 10509129 (+)
prf1.5 LOC106585834 coding upstream 974716 10480130 ~ 10484335 (+)
mpeg1.1 mpeg1 coding upstream 979831 10476333 ~ 10479220 (+)
LOC110525245 LOC106585833 coding upstream 998406 10459637 ~ 10460645 (+)
aptx LOC100136186 coding upstream 1072706 10384908 ~ 10386345 (+)
LOC110525261 ap3s1 coding downstream 79001 11538277 ~ 11561607 (+)
commd10 comda coding downstream 103191 11562467 ~ 11604688 (+)
LOC118965115 NA coding downstream 285393 11744669 ~ 11744803 (+)
LOC110525262 dmxl1 coding downstream 286737 11746013 ~ 11809089 (+)
LOC110525265 LOC106585816 coding downstream 365083 11824359 ~ 11837872 (+)
G473173 NA non-coding upstream 1328 11457492 ~ 11457723 (+)
G473167 NA non-coding upstream 12427 11445117 ~ 11446624 (+)
G473158 pggt1b non-coding upstream 18529 11430163 ~ 11440522 (+)
G473155 NA non-coding upstream 29748 11426291 ~ 11429303 (+)
G473123 NA non-coding upstream 37394 11373194 ~ 11421657 (+)
G473176 NA non-coding downstream 614 11459890 ~ 11460091 (+)
G473177 NA non-coding downstream 1369 11460645 ~ 11460941 (+)
G473702 NA non-coding downstream 11466 11470742 ~ 11475365 (+)
G473709 NA non-coding downstream 19050 11478326 ~ 11478543 (+)
G473739 NA non-coding downstream 51421 11510697 ~ 11511037 (+)
G473070 NA other upstream 179786 11278338 ~ 11279265 (+)
G472364 NA other upstream 1177928 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 2185098 9228570 ~ 9273994 (+)
G470770 NA other upstream 2233538 9223351 ~ 9225513 (+)
G470599 NA other upstream 2648108 8809973 ~ 8810943 (+)
G474321 NA other downstream 729012 12188288 ~ 12190572 (+)
G474851 NA other downstream 1044484 12503760 ~ 12504119 (+)
G474949 NA other downstream 1253030 12712306 ~ 12713298 (+)
G475692 NA other downstream 1854403 13313679 ~ 13313969 (+)
G476234 NA other downstream 2525564 13984840 ~ 13985259 (+)

Expression


Co-expression Network