Gene
RNA
| Item | Value |
|---|---|
| gene id | G473739 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 11510697 ~ 11511037 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cathepsin L1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU538571 | True | 341 | lncRNA | 0.50 | 1 | 11510697 | 11511037 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525250 | hpgds | coding | upstream | 1001568 | 10497758 ~ 10509129 (+) |
| prf1.5 | LOC106585834 | coding | upstream | 1026362 | 10480130 ~ 10484335 (+) |
| mpeg1.1 | mpeg1 | coding | upstream | 1031477 | 10476333 ~ 10479220 (+) |
| LOC110525245 | LOC106585833 | coding | upstream | 1050052 | 10459637 ~ 10460645 (+) |
| aptx | LOC100136186 | coding | upstream | 1124352 | 10384908 ~ 10386345 (+) |
| LOC110525261 | ap3s1 | coding | downstream | 27240 | 11538277 ~ 11561607 (+) |
| commd10 | comda | coding | downstream | 51430 | 11562467 ~ 11604688 (+) |
| LOC118965115 | NA | coding | downstream | 233632 | 11744669 ~ 11744803 (+) |
| LOC110525262 | dmxl1 | coding | downstream | 234976 | 11746013 ~ 11809089 (+) |
| LOC110525265 | LOC106585816 | coding | downstream | 313322 | 11824359 ~ 11837872 (+) |
| G473709 | NA | non-coding | upstream | 32154 | 11478326 ~ 11478543 (+) |
| G473702 | NA | non-coding | upstream | 35332 | 11470742 ~ 11475365 (+) |
| G473177 | NA | non-coding | upstream | 49756 | 11460645 ~ 11460941 (+) |
| G473176 | NA | non-coding | upstream | 50606 | 11459890 ~ 11460091 (+) |
| G473175 | NA | non-coding | upstream | 51421 | 11459051 ~ 11459276 (+) |
| G473744 | NA | non-coding | downstream | 8007 | 11519044 ~ 11519275 (+) |
| G473748 | NA | non-coding | downstream | 11260 | 11522297 ~ 11576779 (+) |
| G473783 | NA | non-coding | downstream | 85315 | 11596352 ~ 11596933 (+) |
| G473785 | NA | non-coding | downstream | 90615 | 11601652 ~ 11602038 (+) |
| G473789 | NA | non-coding | downstream | 95880 | 11606917 ~ 11607129 (+) |
| G473070 | NA | other | upstream | 231432 | 11278338 ~ 11279265 (+) |
| G472364 | NA | other | upstream | 1229574 | 10280306 ~ 10281123 (+) |
| LOC110525088 | LOC106585913 | other | upstream | 2236744 | 9228570 ~ 9273994 (+) |
| G470770 | NA | other | upstream | 2285184 | 9223351 ~ 9225513 (+) |
| G470599 | NA | other | upstream | 2699754 | 8809973 ~ 8810943 (+) |
| G474321 | NA | other | downstream | 677251 | 12188288 ~ 12190572 (+) |
| G474851 | NA | other | downstream | 992723 | 12503760 ~ 12504119 (+) |
| G474949 | NA | other | downstream | 1201269 | 12712306 ~ 12713298 (+) |
| G475692 | NA | other | downstream | 1802642 | 13313679 ~ 13313969 (+) |
| G476234 | NA | other | downstream | 2473803 | 13984840 ~ 13985259 (+) |
