Gene
RNA
| Item | Value |
|---|---|
| gene id | G473744 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 11519044 ~ 11519275 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU538576 | True | 232 | lncRNA | 0.43 | 1 | 11519044 | 11519275 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525250 | hpgds | coding | upstream | 1009915 | 10497758 ~ 10509129 (+) |
| prf1.5 | LOC106585834 | coding | upstream | 1034709 | 10480130 ~ 10484335 (+) |
| mpeg1.1 | mpeg1 | coding | upstream | 1039824 | 10476333 ~ 10479220 (+) |
| LOC110525245 | LOC106585833 | coding | upstream | 1058399 | 10459637 ~ 10460645 (+) |
| aptx | LOC100136186 | coding | upstream | 1132699 | 10384908 ~ 10386345 (+) |
| LOC110525261 | ap3s1 | coding | downstream | 19002 | 11538277 ~ 11561607 (+) |
| commd10 | comda | coding | downstream | 43192 | 11562467 ~ 11604688 (+) |
| LOC118965115 | NA | coding | downstream | 225394 | 11744669 ~ 11744803 (+) |
| LOC110525262 | dmxl1 | coding | downstream | 226738 | 11746013 ~ 11809089 (+) |
| LOC110525265 | LOC106585816 | coding | downstream | 305084 | 11824359 ~ 11837872 (+) |
| G473739 | NA | non-coding | upstream | 8007 | 11510697 ~ 11511037 (+) |
| G473709 | NA | non-coding | upstream | 40501 | 11478326 ~ 11478543 (+) |
| G473702 | NA | non-coding | upstream | 43679 | 11470742 ~ 11475365 (+) |
| G473177 | NA | non-coding | upstream | 58103 | 11460645 ~ 11460941 (+) |
| G473176 | NA | non-coding | upstream | 58953 | 11459890 ~ 11460091 (+) |
| G473748 | NA | non-coding | downstream | 3022 | 11522297 ~ 11576779 (+) |
| G473783 | NA | non-coding | downstream | 77077 | 11596352 ~ 11596933 (+) |
| G473785 | NA | non-coding | downstream | 82377 | 11601652 ~ 11602038 (+) |
| G473789 | NA | non-coding | downstream | 87642 | 11606917 ~ 11607129 (+) |
| G473790 | NA | non-coding | downstream | 88296 | 11607571 ~ 11607815 (+) |
| G473070 | NA | other | upstream | 239779 | 11278338 ~ 11279265 (+) |
| G472364 | NA | other | upstream | 1237921 | 10280306 ~ 10281123 (+) |
| LOC110525088 | LOC106585913 | other | upstream | 2245091 | 9228570 ~ 9273994 (+) |
| G470770 | NA | other | upstream | 2293531 | 9223351 ~ 9225513 (+) |
| G470599 | NA | other | upstream | 2708101 | 8809973 ~ 8810943 (+) |
| G474321 | NA | other | downstream | 669013 | 12188288 ~ 12190572 (+) |
| G474851 | NA | other | downstream | 984485 | 12503760 ~ 12504119 (+) |
| G474949 | NA | other | downstream | 1193031 | 12712306 ~ 12713298 (+) |
| G475692 | NA | other | downstream | 1794404 | 13313679 ~ 13313969 (+) |
| G476234 | NA | other | downstream | 2465565 | 13984840 ~ 13985259 (+) |
