G473796


Basic Information

Item Value
gene id G473796
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 11613092 ~ 11613389 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU538636
CTCATAGACATGTCACAATATGAGCACCCCATACACATGTCACAATATGATCCCCTCATAGACATGTCCCAATATGATCCCCTCATAGACATGTCACAATAAGAGCACCTTATAGACATGTCACAATATGATCCCCTCATAGACATGTCACAATATGAGCACCCCATACACATGTCACAATATGATCCCCTCATAGACATGTCACAATAAGAGCACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106606019

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU538636 True 217 lncRNA 0.42 2 11613092 11613389

Neighbor

gene id symbol gene type direction distance location
commd10 comda coding upstream 8404 11562467 ~ 11604688 (+)
LOC110525261 ap3s1 coding upstream 51485 11538277 ~ 11561607 (+)
LOC110525250 hpgds coding upstream 1103963 10497758 ~ 10509129 (+)
prf1.5 LOC106585834 coding upstream 1128757 10480130 ~ 10484335 (+)
mpeg1.1 mpeg1 coding upstream 1133872 10476333 ~ 10479220 (+)
LOC118965115 NA coding downstream 131280 11744669 ~ 11744803 (+)
LOC110525262 dmxl1 coding downstream 132624 11746013 ~ 11809089 (+)
LOC110525265 LOC106585816 coding downstream 210970 11824359 ~ 11837872 (+)
pheta1 LOC106585851 coding downstream 240507 11853896 ~ 11857562 (+)
sh2b3 LOC106585852 coding downstream 275548 11888937 ~ 11950017 (+)
G473791 NA non-coding upstream 4858 11607869 ~ 11608234 (+)
G473790 NA non-coding upstream 5277 11607571 ~ 11607815 (+)
G473789 NA non-coding upstream 5963 11606917 ~ 11607129 (+)
G473785 NA non-coding upstream 11054 11601652 ~ 11602038 (+)
G473783 NA non-coding upstream 16159 11596352 ~ 11596933 (+)
G473799 NA non-coding downstream 1245 11614634 ~ 11614911 (+)
G473801 NA non-coding downstream 4123 11617512 ~ 11618242 (+)
G473806 NA non-coding downstream 9727 11623116 ~ 11623353 (+)
G473819 NA non-coding downstream 32502 11645891 ~ 11646146 (+)
G473858 NA non-coding downstream 80671 11694060 ~ 11694323 (+)
G473070 NA other upstream 333827 11278338 ~ 11279265 (+)
G472364 NA other upstream 1331969 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 2339139 9228570 ~ 9273994 (+)
G470770 NA other upstream 2387579 9223351 ~ 9225513 (+)
G470599 NA other upstream 2802149 8809973 ~ 8810943 (+)
G474321 NA other downstream 574899 12188288 ~ 12190572 (+)
G474851 NA other downstream 890371 12503760 ~ 12504119 (+)
G474949 NA other downstream 1098917 12712306 ~ 12713298 (+)
G475692 NA other downstream 1700290 13313679 ~ 13313969 (+)
G476234 NA other downstream 2371451 13984840 ~ 13985259 (+)

Expression


Co-expression Network