Gene
RNA
| Item | Value |
|---|---|
| gene id | G474038 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 11799914 ~ 11800392 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU538910 | True | 289 | lncRNA | 0.45 | 2 | 11799914 | 11800392 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965115 | NA | coding | upstream | 55111 | 11744669 ~ 11744803 (+) |
| commd10 | comda | coding | upstream | 195226 | 11562467 ~ 11604688 (+) |
| LOC110525261 | ap3s1 | coding | upstream | 238307 | 11538277 ~ 11561607 (+) |
| LOC110525250 | hpgds | coding | upstream | 1290785 | 10497758 ~ 10509129 (+) |
| prf1.5 | LOC106585834 | coding | upstream | 1315579 | 10480130 ~ 10484335 (+) |
| LOC110525265 | LOC106585816 | coding | downstream | 23967 | 11824359 ~ 11837872 (+) |
| pheta1 | LOC106585851 | coding | downstream | 53504 | 11853896 ~ 11857562 (+) |
| sh2b3 | LOC106585852 | coding | downstream | 88545 | 11888937 ~ 11950017 (+) |
| LOC110525268 | mapkapk5 | coding | downstream | 187970 | 11988362 ~ 12010362 (+) |
| LOC110525274 | idnk | coding | downstream | 443989 | 12244381 ~ 12247297 (+) |
| G473858 | NA | non-coding | upstream | 105591 | 11694060 ~ 11694323 (+) |
| G473819 | NA | non-coding | upstream | 153768 | 11645891 ~ 11646146 (+) |
| G473806 | NA | non-coding | upstream | 176561 | 11623116 ~ 11623353 (+) |
| G473801 | NA | non-coding | upstream | 181672 | 11617512 ~ 11618242 (+) |
| G473799 | NA | non-coding | upstream | 185003 | 11614634 ~ 11614911 (+) |
| G474142 | NA | non-coding | downstream | 41382 | 11841774 ~ 11842085 (+) |
| G474143 | NA | non-coding | downstream | 42517 | 11842909 ~ 11843237 (+) |
| G474185 | NA | non-coding | downstream | 80198 | 11880590 ~ 11880841 (+) |
| G474189 | NA | non-coding | downstream | 83842 | 11884234 ~ 11884593 (+) |
| G474193 | NA | non-coding | downstream | 91772 | 11892164 ~ 11892377 (+) |
| G473070 | NA | other | upstream | 520649 | 11278338 ~ 11279265 (+) |
| G472364 | NA | other | upstream | 1518791 | 10280306 ~ 10281123 (+) |
| LOC110525088 | LOC106585913 | other | upstream | 2525961 | 9228570 ~ 9273994 (+) |
| G470770 | NA | other | upstream | 2574401 | 9223351 ~ 9225513 (+) |
| G470599 | NA | other | upstream | 2988971 | 8809973 ~ 8810943 (+) |
| G474321 | NA | other | downstream | 387896 | 12188288 ~ 12190572 (+) |
| G474851 | NA | other | downstream | 703368 | 12503760 ~ 12504119 (+) |
| G474949 | NA | other | downstream | 911914 | 12712306 ~ 12713298 (+) |
| G475692 | NA | other | downstream | 1513287 | 13313679 ~ 13313969 (+) |
| G476234 | NA | other | downstream | 2184448 | 13984840 ~ 13985259 (+) |
