G474165


Basic Information

Item Value
gene id G474165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 11950081 ~ 11950396 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU539046
tcagcaacaagcactcctgtgttccaatggcacgttgttagctaatccaagtttatcattttaaaaggctaattgattattagaacagctgaaaactgttgtcctgattaaagcagcaataaaactggcctttagactagttcagtatctggagcatttgtgggttagattacaggctcaaaatggccagaaacgtcagtctatacttgttctgagaaaggaaggctattccatgcgagaaattgccaagaaactgtagatctcgtacaatgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU539046 True 274 lncRNA 0.39 3 11950081 11950396

Neighbor

gene id symbol gene type direction distance location
sh2b3 LOC106585852 coding upstream 64 11888937 ~ 11950017 (+)
pheta1 LOC106585851 coding upstream 92519 11853896 ~ 11857562 (+)
LOC110525265 LOC106585816 coding upstream 112209 11824359 ~ 11837872 (+)
LOC110525262 dmxl1 coding upstream 140992 11746013 ~ 11809089 (+)
LOC118965115 NA coding upstream 205278 11744669 ~ 11744803 (+)
LOC110525268 mapkapk5 coding downstream 37966 11988362 ~ 12010362 (+)
LOC110525274 idnk coding downstream 293985 12244381 ~ 12247297 (+)
LOC110525277 LOC106585857 coding downstream 322165 12236437 ~ 12283249 (+)
LOC118964798 NA coding downstream 347977 12298373 ~ 12299383 (+)
LOC110525280 LOC106585811 coding downstream 609920 12560316 ~ 12564798 (+)
G474193 NA non-coding upstream 57704 11892164 ~ 11892377 (+)
G474189 NA non-coding upstream 65488 11884234 ~ 11884593 (+)
G474185 NA non-coding upstream 69240 11880590 ~ 11880841 (+)
G474143 NA non-coding upstream 106844 11842909 ~ 11843237 (+)
G474160 NA non-coding downstream 435 11950831 ~ 11951136 (+)
G474159 NA non-coding downstream 2140 11952536 ~ 11953870 (+)
G474221 NA non-coding downstream 36319 11986715 ~ 11987031 (+)
G474230 NA non-coding downstream 62068 12012464 ~ 12012773 (+)
G473070 NA other upstream 670816 11278338 ~ 11279265 (+)
G472364 NA other upstream 1668958 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 2676128 9228570 ~ 9273994 (+)
G470770 NA other upstream 2724568 9223351 ~ 9225513 (+)
G470599 NA other upstream 3139138 8809973 ~ 8810943 (+)
G474321 NA other downstream 237892 12188288 ~ 12190572 (+)
G474851 NA other downstream 553364 12503760 ~ 12504119 (+)
G474949 NA other downstream 761910 12712306 ~ 12713298 (+)
G475692 NA other downstream 1363283 13313679 ~ 13313969 (+)
G476234 NA other downstream 2034444 13984840 ~ 13985259 (+)

Expression


Co-expression Network