XLOC_024106 (CR354549.12)


Basic Information

Item Value
gene id XLOC_024106
gene name CR354549.12
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 23165191 ~ 23168230 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047824
GTCAAAATcatgataattttatttttttgcatctcAATGTTTCAGCATCTCCTGCCAGTACAAGCTCTTCTACAACTGAGCCTCAAACAGCAGAACCTACAACCTCTGCCACAACAAACTCTCCATATACTGAGTCTCCCACATCAGTTCTTTCAACATCTCCTGCCAGTCCAAGTGCTTCTACAACTGAGACTCAAACAACAGAACCTACAACACCGCCTGCAAGTGCAAGCCCTTCAGATTCTCAAACAGCAGAACCCACAAGTAAGTAATACACAAGTACAGTTGTATGAAAAGTATTCCAGGAATGTTTAACCATTCTGCtgttaatgtaaattaaaattgtaGTGAGTAGTCAGGGTGACAACAGAGGGGATAATTCACAGTT
>TCONS_00047825
ttTAGATAGATTTCACATGTAAAAAATGATATCgtatatgcaaaataaatatcaaaatattccAAAAATGGTCATTTACATCTATTTCATCATTAAAATATCCCATCAGCCTCTGCCACAACAAACTCTCCATATACTGAGTCTCCCACATCAGTTCTTTCAACATCTCCTGCCAGTCCAAGTGCTTCTACAACTGAGACTCAAACAACAGAACCTACAACACCGCCTGCAAGTGCAAGCCCTTCAGATTCTCAAACAGCAGAACCCACAAGTAAGTAATACACAAGTACAGTTGTATGAAAAGTATTCCAGGAATGTTTAACCATTCTGCtgttaatgtaaattaaaattgtaGTGAGTAGTCAGGGTGACAACAGAGGGGATAATTCACAGTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117793

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047824 False 388 lncRNA 0.40 4 23165191 23168230
TCONS_00047825 True 395 lncRNA 0.36 3 23165567 23168230

Neighbor

gene id symbol gene type direction distance location
XLOC_024105 CR354549.1 coding upstream 167 23163952 ~ 23165024 (+)
XLOC_024104 CR354549.4 coding upstream 1820 23160076 ~ 23163371 (+)
XLOC_024103 CR354549.2 coding upstream 6304 23157622 ~ 23158887 (+)
XLOC_024102 CR354549.8 coding upstream 14140 23147602 ~ 23151051 (+)
XLOC_024101 CR354549.6 coding upstream 18610 23140524 ~ 23146581 (+)
XLOC_024107 CR354549.9 coding downstream 2071 23170301 ~ 23177833 (+)
XLOC_024108 CR354549.10 coding downstream 19146 23187376 ~ 23188515 (+)
XLOC_024109 CR354549.5 coding downstream 31836 23200066 ~ 23201809 (+)
XLOC_024110 CR354549.3 coding downstream 33781 23202011 ~ 23229282 (+)
XLOC_024111 NA coding downstream 37438 23205668 ~ 23206162 (+)
XLOC_023973 CR762411.1 misc upstream 7947082 15217824 ~ 15218109 (+)

Expression


Co-expression Network