G474230


Basic Information

Item Value
gene id G474230
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 12012464 ~ 12012773 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU539115
ctaacatctctggagagacctgaaaatagctgtgtagcaatgctccccatccaagctaacagagcttgagaggatctgcagagaagaatgggagcaaatccaggtgtgccaagcttgtagcgtcatacccaagaagacttgacgctgtaatcgctgccagaggtgcttcaacaaagtactaattTTATTTAAATTAGCCAagatttctaaacctgtttttgctttgtcattttggggtattgtgtgtagattgagattaAGAAATAATAatagtttagaataaggctgtaacgtaacatttGGAAAATGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU539115 True 310 lncRNA 0.39 1 12012464 12012773

Neighbor

gene id symbol gene type direction distance location
LOC110525268 mapkapk5 coding upstream 2445 11988362 ~ 12010362 (+)
sh2b3 LOC106585852 coding upstream 62447 11888937 ~ 11950017 (+)
pheta1 LOC106585851 coding upstream 154902 11853896 ~ 11857562 (+)
LOC110525265 LOC106585816 coding upstream 174592 11824359 ~ 11837872 (+)
LOC110525262 dmxl1 coding upstream 203375 11746013 ~ 11809089 (+)
LOC110525274 idnk coding downstream 231608 12244381 ~ 12247297 (+)
LOC110525277 LOC106585857 coding downstream 259788 12236437 ~ 12283249 (+)
LOC118964798 NA coding downstream 285600 12298373 ~ 12299383 (+)
LOC110525280 LOC106585811 coding downstream 547543 12560316 ~ 12564798 (+)
LOC110525282 LOC106585808 coding downstream 571198 12583971 ~ 12586483 (+)
G474221 NA non-coding upstream 25433 11986715 ~ 11987031 (+)
G474159 NA non-coding upstream 58594 11952536 ~ 11953870 (+)
G474160 NA non-coding upstream 61328 11950831 ~ 11951136 (+)
G474165 NA non-coding upstream 62068 11950081 ~ 11950396 (+)
G474237 NA non-coding downstream 13820 12026593 ~ 12026830 (+)
G474240 NA non-coding downstream 18946 12031719 ~ 12031949 (+)
G474264 NA non-coding downstream 77522 12090295 ~ 12090501 (+)
G474266 NA non-coding downstream 82864 12095637 ~ 12095854 (+)
G474268 NA non-coding downstream 84491 12097264 ~ 12097547 (+)
G473070 NA other upstream 733199 11278338 ~ 11279265 (+)
G472364 NA other upstream 1731341 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 2738511 9228570 ~ 9273994 (+)
G470770 NA other upstream 2786951 9223351 ~ 9225513 (+)
G470599 NA other upstream 3201521 8809973 ~ 8810943 (+)
G474321 NA other downstream 175515 12188288 ~ 12190572 (+)
G474851 NA other downstream 490987 12503760 ~ 12504119 (+)
G474949 NA other downstream 699533 12712306 ~ 12713298 (+)
G475692 NA other downstream 1300906 13313679 ~ 13313969 (+)
G476234 NA other downstream 1972067 13984840 ~ 13985259 (+)

Expression


Co-expression Network