Gene
RNA
| Item | Value |
|---|---|
| gene id | G474641 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 12096484 ~ 12096832 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU539619 | True | 349 | lncRNA | 0.41 | 1 | 12096484 | 12096832 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525269 | tle1 | coding | downstream | 33197 | 12040527 ~ 12063287 (-) |
| LOC110525267 | LOC106585853 | coding | downstream | 117087 | 11955217 ~ 11979397 (-) |
| hsd17b4 | hsd17b4 | coding | downstream | 273874 | 11808873 ~ 11822610 (-) |
| LOC110525095 | LOC106585847 | coding | downstream | 375139 | 11629016 ~ 11721345 (-) |
| LOC110525260 | cdo1 | coding | downstream | 568412 | 11522292 ~ 11537417 (-) |
| rasef | rasef | coding | upstream | 6423 | 12103255 ~ 12139444 (-) |
| LOC110525271 | LOC106585862 | coding | upstream | 42786 | 12139618 ~ 12157601 (-) |
| frmd3 | frmd3 | coding | upstream | 67735 | 12164567 ~ 12244072 (-) |
| LOC110525275 | LOC106585859 | coding | upstream | 153649 | 12250481 ~ 12257863 (-) |
| gkap1 | gkap1 | coding | upstream | 161783 | 12258615 ~ 12271556 (-) |
| G474627 | NA | non-coding | downstream | 38005 | 12058042 ~ 12058479 (-) |
| G474609 | NA | non-coding | downstream | 76534 | 12019722 ~ 12019950 (-) |
| G474605 | NA | non-coding | downstream | 86378 | 12008802 ~ 12010106 (-) |
| G474535 | NA | non-coding | downstream | 147096 | 11949051 ~ 11949388 (-) |
| G474583 | NA | non-coding | downstream | 159937 | 11936283 ~ 11936547 (-) |
| G474646 | NA | non-coding | upstream | 25790 | 12122622 ~ 12123474 (-) |
| G474649 | NA | non-coding | upstream | 35522 | 12132354 ~ 12132629 (-) |
| G474664 | NA | non-coding | upstream | 184807 | 12281639 ~ 12282596 (-) |
| G474722 | NA | non-coding | upstream | 188263 | 12285095 ~ 12285402 (-) |
| G474728 | NA | non-coding | upstream | 208431 | 12305263 ~ 12305530 (-) |
| G474614 | NA | other | downstream | 66874 | 12029159 ~ 12029610 (-) |
| G474030 | NA | other | downstream | 353726 | 11742202 ~ 11742758 (-) |
| G473930 | NA | other | downstream | 494487 | 11601515 ~ 11601997 (-) |
| LOC110525252 | ccser1 | other | downstream | 712038 | 11280815 ~ 11390675 (-) |
| LOC110525279 | LOC106585809 | other | upstream | 327629 | 12310179 ~ 12555360 (-) |
| G475413 | NA | other | upstream | 855420 | 12952252 ~ 12954051 (-) |
| LOC110525296 | arrdc3 | other | upstream | 932553 | 13026299 ~ 13046348 (-) |
| G475573 | NA | other | upstream | 1100483 | 13197315 ~ 13198012 (-) |
| fam172a | LOC106585793 | other | upstream | 1934583 | 13758198 ~ 14087746 (-) |
