Gene
RNA
| Item | Value |
|---|---|
| gene id | G474336 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 12216100 ~ 12216462 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU539244 | True | 223 | lncRNA | 0.48 | 2 | 12216100 | 12216462 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525268 | mapkapk5 | coding | upstream | 206081 | 11988362 ~ 12010362 (+) |
| sh2b3 | LOC106585852 | coding | upstream | 266083 | 11888937 ~ 11950017 (+) |
| pheta1 | LOC106585851 | coding | upstream | 358538 | 11853896 ~ 11857562 (+) |
| LOC110525265 | LOC106585816 | coding | upstream | 378228 | 11824359 ~ 11837872 (+) |
| LOC110525262 | dmxl1 | coding | upstream | 407011 | 11746013 ~ 11809089 (+) |
| LOC110525274 | idnk | coding | downstream | 27919 | 12244381 ~ 12247297 (+) |
| LOC110525277 | LOC106585857 | coding | downstream | 56099 | 12236437 ~ 12283249 (+) |
| LOC118964798 | NA | coding | downstream | 81911 | 12298373 ~ 12299383 (+) |
| LOC110525280 | LOC106585811 | coding | downstream | 343854 | 12560316 ~ 12564798 (+) |
| LOC110525282 | LOC106585808 | coding | downstream | 367509 | 12583971 ~ 12586483 (+) |
| G474323 | NA | non-coding | upstream | 23210 | 12191784 ~ 12192890 (+) |
| G474314 | NA | non-coding | upstream | 39334 | 12176345 ~ 12176766 (+) |
| G474307 | NA | non-coding | upstream | 54695 | 12158717 ~ 12161405 (+) |
| G474275 | NA | non-coding | upstream | 111646 | 12104014 ~ 12104454 (+) |
| G474273 | NA | non-coding | upstream | 112170 | 12102128 ~ 12103930 (+) |
| G474365 | NA | non-coding | downstream | 34026 | 12250488 ~ 12252286 (+) |
| G474354 | NA | non-coding | downstream | 46463 | 12262925 ~ 12271443 (+) |
| G474392 | NA | non-coding | downstream | 88632 | 12305094 ~ 12305349 (+) |
| G474475 | NA | non-coding | downstream | 213875 | 12430337 ~ 12430812 (+) |
| G474321 | NA | other | upstream | 25528 | 12188288 ~ 12190572 (+) |
| G473070 | NA | other | upstream | 936835 | 11278338 ~ 11279265 (+) |
| G472364 | NA | other | upstream | 1934977 | 10280306 ~ 10281123 (+) |
| LOC110525088 | LOC106585913 | other | upstream | 2942147 | 9228570 ~ 9273994 (+) |
| G470770 | NA | other | upstream | 2990587 | 9223351 ~ 9225513 (+) |
| G474851 | NA | other | downstream | 287298 | 12503760 ~ 12504119 (+) |
| G474949 | NA | other | downstream | 495844 | 12712306 ~ 12713298 (+) |
| G475692 | NA | other | downstream | 1097217 | 13313679 ~ 13313969 (+) |
| G476234 | NA | other | downstream | 1768378 | 13984840 ~ 13985259 (+) |
| G476248 | NA | other | downstream | 1780622 | 13997084 ~ 14015564 (+) |
