G474354


Basic Information

Item Value
gene id G474354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 12262925 ~ 12271443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU539299
GGCCTCGCTCTGTTGCTGCTCTTTCTTCTTCTTACGCTTTTCCTTCTTCTTGTCGTTGCTTGCAGTGGATTTCCCACTGGTTGTCTTCCCGGGCCGAGTCTTTCCAGAGTCCCGGGCGCCTTTAGTCCTTCCTGACTCTGAATCGGAGTCGGAATCAGAGTCGACCTGGAGCAGGGCAAAGCGAGAGGCTGTGGTGTGGACGGAGATCATTGCTGACGCCATCTGCTGACCTGTGCACAACCTAAACTTTCACCTGTTCGAGTAGTTAACCACACGTT

Function

NR:

description
G kinase-anchoring protein 1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU539299 True 278 lncRNA 0.54 2 12262925 12271443

Neighbor

gene id symbol gene type direction distance location
LOC110525274 idnk coding upstream 15628 12244381 ~ 12247297 (+)
LOC110525268 mapkapk5 coding upstream 252906 11988362 ~ 12010362 (+)
sh2b3 LOC106585852 coding upstream 312908 11888937 ~ 11950017 (+)
pheta1 LOC106585851 coding upstream 405363 11853896 ~ 11857562 (+)
LOC110525265 LOC106585816 coding upstream 425053 11824359 ~ 11837872 (+)
LOC110525277 LOC106585857 coding downstream 1118 12236437 ~ 12283249 (+)
LOC118964798 NA coding downstream 26930 12298373 ~ 12299383 (+)
LOC110525280 LOC106585811 coding downstream 288873 12560316 ~ 12564798 (+)
LOC110525282 LOC106585808 coding downstream 312528 12583971 ~ 12586483 (+)
hspb11 hspb11 coding downstream 444450 12715893 ~ 12717368 (+)
G474365 NA non-coding upstream 10639 12250488 ~ 12252286 (+)
G474336 NA non-coding upstream 46463 12216100 ~ 12216462 (+)
G474323 NA non-coding upstream 70035 12191784 ~ 12192890 (+)
G474314 NA non-coding upstream 86159 12176345 ~ 12176766 (+)
G474307 NA non-coding upstream 101520 12158717 ~ 12161405 (+)
G474392 NA non-coding downstream 33651 12305094 ~ 12305349 (+)
G474475 NA non-coding downstream 158894 12430337 ~ 12430812 (+)
G474477 NA non-coding downstream 161524 12432967 ~ 12433167 (+)
G474478 NA non-coding downstream 162032 12433475 ~ 12433876 (+)
G474481 NA non-coding downstream 166510 12437953 ~ 12438180 (+)
G474321 NA other upstream 72353 12188288 ~ 12190572 (+)
G473070 NA other upstream 983660 11278338 ~ 11279265 (+)
G472364 NA other upstream 1981802 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 2988972 9228570 ~ 9273994 (+)
G470770 NA other upstream 3037412 9223351 ~ 9225513 (+)
G474851 NA other downstream 232317 12503760 ~ 12504119 (+)
G474949 NA other downstream 440863 12712306 ~ 12713298 (+)
G475692 NA other downstream 1042236 13313679 ~ 13313969 (+)
G476234 NA other downstream 1713397 13984840 ~ 13985259 (+)
G476248 NA other downstream 1725641 13997084 ~ 14015564 (+)

Expression


Co-expression Network