G474475


Basic Information

Item Value
gene id G474475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 12430337 ~ 12430812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU539430
GTCACAGAGATCTCCACCCCCAGCCTGGCTCCACCAATAACACGCATTAGAGTCACACTGAAGTGCTCCACAGACTCCACCTCCGTGTCATCCACGATGCTGATGTCTATAATGGCCTGTCCCTGCAAACAGAACTTATCCTTATCCTTCATAGAAGCTCAACTAGACTTAGTGGATCGAAGTTACATAGGTGACATAACTTAACTATGTGATCTAACAGGAGAAACTCTCTAACCATAGTTGTAATCAAATCACCTGTCCATCTTGAAAGGTGATATTCCCAGAAGAGGGAGTGAAGTCATTGAGACTGGTAGTGATTGGCCGAGCCTCCCAGTACACCACCACTCTCCCAGTCCTGCCAGCCAATCGCACCACTGCTAGATGGAGGACGTTTCTGGGCGGAGCCACCTCATAGGCCAGCAACCCTCCAGACTCTTCCTAAGAATTAGACACAGAAACAGAGTTGGAGCATTAAA

Function

NR:

description
G-protein coupled receptor 98-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU539430 True 476 lncRNA 0.48 1 12430337 12430812

Neighbor

gene id symbol gene type direction distance location
LOC118964798 NA coding upstream 130954 12298373 ~ 12299383 (+)
LOC110525277 LOC106585857 coding upstream 147712 12236437 ~ 12283249 (+)
LOC110525274 idnk coding upstream 183040 12244381 ~ 12247297 (+)
LOC110525268 mapkapk5 coding upstream 420318 11988362 ~ 12010362 (+)
sh2b3 LOC106585852 coding upstream 480320 11888937 ~ 11950017 (+)
LOC110525280 LOC106585811 coding downstream 129504 12560316 ~ 12564798 (+)
LOC110525282 LOC106585808 coding downstream 153159 12583971 ~ 12586483 (+)
hspb11 hspb11 coding downstream 285081 12715893 ~ 12717368 (+)
LOC110525291 LOC106585801 coding downstream 451792 12882604 ~ 12888336 (+)
arsk arsk coding downstream 457673 12888485 ~ 12895776 (+)
G474392 NA non-coding upstream 124988 12305094 ~ 12305349 (+)
G474354 NA non-coding upstream 158894 12262925 ~ 12271443 (+)
G474365 NA non-coding upstream 178051 12250488 ~ 12252286 (+)
G474336 NA non-coding upstream 213875 12216100 ~ 12216462 (+)
G474477 NA non-coding downstream 2155 12432967 ~ 12433167 (+)
G474478 NA non-coding downstream 2663 12433475 ~ 12433876 (+)
G474481 NA non-coding downstream 7141 12437953 ~ 12438180 (+)
G474840 NA non-coding downstream 54544 12485356 ~ 12485702 (+)
G474847 NA non-coding downstream 66974 12497786 ~ 12498004 (+)
G474321 NA other upstream 239765 12188288 ~ 12190572 (+)
G473070 NA other upstream 1151072 11278338 ~ 11279265 (+)
G472364 NA other upstream 2149214 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 3156384 9228570 ~ 9273994 (+)
G470770 NA other upstream 3204824 9223351 ~ 9225513 (+)
G474851 NA other downstream 72948 12503760 ~ 12504119 (+)
G474949 NA other downstream 281494 12712306 ~ 12713298 (+)
G475692 NA other downstream 882867 13313679 ~ 13313969 (+)
G476234 NA other downstream 1554028 13984840 ~ 13985259 (+)
G476248 NA other downstream 1566272 13997084 ~ 14015564 (+)

Expression


Co-expression Network