G474851


Basic Information

Item Value
gene id G474851
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 12503760 ~ 12504119 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU539852
cacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttgccaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaatatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatcca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU539852 True 360 TUCP 0.43 1 12503760 12504119

Neighbor

gene id symbol gene type direction distance location
LOC118964798 NA coding upstream 204377 12298373 ~ 12299383 (+)
LOC110525277 LOC106585857 coding upstream 221135 12236437 ~ 12283249 (+)
LOC110525274 idnk coding upstream 256463 12244381 ~ 12247297 (+)
LOC110525268 mapkapk5 coding upstream 493741 11988362 ~ 12010362 (+)
sh2b3 LOC106585852 coding upstream 553743 11888937 ~ 11950017 (+)
LOC110525280 LOC106585811 coding downstream 56197 12560316 ~ 12564798 (+)
LOC110525282 LOC106585808 coding downstream 79852 12583971 ~ 12586483 (+)
hspb11 hspb11 coding downstream 211774 12715893 ~ 12717368 (+)
LOC110525291 LOC106585801 coding downstream 378485 12882604 ~ 12888336 (+)
arsk arsk coding downstream 384366 12888485 ~ 12895776 (+)
G474847 NA non-coding upstream 5756 12497786 ~ 12498004 (+)
G474840 NA non-coding upstream 18058 12485356 ~ 12485702 (+)
G474481 NA non-coding upstream 65580 12437953 ~ 12438180 (+)
G474478 NA non-coding upstream 69884 12433475 ~ 12433876 (+)
G474477 NA non-coding upstream 70593 12432967 ~ 12433167 (+)
G474852 NA non-coding downstream 43 12504162 ~ 12577127 (+)
G474858 NA non-coding downstream 18300 12522419 ~ 12522878 (+)
G474945 NA non-coding downstream 202246 12706365 ~ 12776504 (+)
G474948 LOC106585806 non-coding downstream 209657 12713776 ~ 12715008 (+)
G474953 NA non-coding downstream 217095 12721214 ~ 12722439 (+)
G474321 NA other upstream 313188 12188288 ~ 12190572 (+)
G473070 NA other upstream 1224495 11278338 ~ 11279265 (+)
G472364 NA other upstream 2222637 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 3229807 9228570 ~ 9273994 (+)
G470770 NA other upstream 3278247 9223351 ~ 9225513 (+)
G474949 NA other downstream 208187 12712306 ~ 12713298 (+)
G475692 NA other downstream 809560 13313679 ~ 13313969 (+)
G476234 NA other downstream 1480721 13984840 ~ 13985259 (+)
G476248 NA other downstream 1492965 13997084 ~ 14015564 (+)
G479239 NA other downstream 3855297 16359416 ~ 16359751 (+)

Expression


Co-expression Network