G474949


Basic Information

Item Value
gene id G474949
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 12712306 ~ 12713298 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU539960
GCctttatttgttttattcacaAAGAATACAAAAACATGCCTCCAAAGTGTTTTGGAGTTTTGAAACAGGAATGCATTCACATGTTACATTTAATTGACAACACTCCCGTCCTCTTCATCTGGGATGGAGACACACACCTGGTAAGAACAGAAGTCCCCTTTCTCACTTGTGGCGAGTCTTCCTTCCAGACACAGCTTCTTTGCGGCCTTGTTTCAAACCCAGGTAGTATCCAGTGTGGTAACCACTCATGTACCAGGCGAGCAGCATACCTCCCAGAGCCGCATCATCCTCTCCGTTTGGACtcatggggggaggaggagggatcaTCTGAGAGACAAAACGCATTCAGAGGGAATCTATCATAACGTTGCAGAGATTGCAGAGATAAATGTCCTAACAAAACACTGCTCAGTAAGCTCCATGTGTGTTCTCTATCAGCAACACTAAACAGTCGAGAGGGGGTTTGACTCTTTATTCAGAGACTAAGGAAGATCAGAGTGGGAGACAGGCAAGTGGAGAAACCGTG

Function

NR:

description
survival motor neuron protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU539960 True 527 TUCP 0.46 3 12712306 12713298

Neighbor

gene id symbol gene type direction distance location
LOC110525282 LOC106585808 coding upstream 125823 12583971 ~ 12586483 (+)
LOC110525280 LOC106585811 coding upstream 147508 12560316 ~ 12564798 (+)
LOC118964798 NA coding upstream 412923 12298373 ~ 12299383 (+)
LOC110525277 LOC106585857 coding upstream 429681 12236437 ~ 12283249 (+)
LOC110525274 idnk coding upstream 465009 12244381 ~ 12247297 (+)
hspb11 hspb11 coding downstream 2595 12715893 ~ 12717368 (+)
LOC110525291 LOC106585801 coding downstream 169306 12882604 ~ 12888336 (+)
arsk arsk coding downstream 175187 12888485 ~ 12895776 (+)
nol6 nol6 coding downstream 183653 12896951 ~ 12925948 (+)
aqp3a LOC106585799 coding downstream 227472 12940770 ~ 12954059 (+)
G474852 NA non-coding upstream 135179 12504162 ~ 12577127 (+)
G474858 NA non-coding upstream 189428 12522419 ~ 12522878 (+)
G474847 NA non-coding upstream 214302 12497786 ~ 12498004 (+)
G474840 NA non-coding upstream 226604 12485356 ~ 12485702 (+)
G474481 NA non-coding upstream 274126 12437953 ~ 12438180 (+)
G474948 LOC106585806 non-coding downstream 478 12713776 ~ 12715008 (+)
G474953 NA non-coding downstream 7916 12721214 ~ 12722439 (+)
G474995 NA non-coding downstream 76278 12789576 ~ 12795442 (+)
G475009 NA non-coding downstream 105798 12819096 ~ 12819405 (+)
G475049 NA non-coding downstream 204509 12917807 ~ 12920286 (+)
G474851 NA other upstream 208187 12503760 ~ 12504119 (+)
G474321 NA other upstream 521734 12188288 ~ 12190572 (+)
G473070 NA other upstream 1433041 11278338 ~ 11279265 (+)
G472364 NA other upstream 2431183 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 3438353 9228570 ~ 9273994 (+)
G475692 NA other downstream 600381 13313679 ~ 13313969 (+)
G476234 NA other downstream 1271542 13984840 ~ 13985259 (+)
G476248 NA other downstream 1283786 13997084 ~ 14015564 (+)
G479239 NA other downstream 3646118 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 4265884 16970834 ~ 16982251 (+)

Expression


Co-expression Network