G475771


Basic Information

Item Value
gene id G475771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 13370779 ~ 13370989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU540859
ctattggggaactgtgggagggatcttggagggttcggttTCACGTTTTTTTgcctggtgggagatctgtcaacgtgcccttgagcagggcattgaccctggatgcttctgtgtttCGCTCTGAATTTGactctgttggatgactggtatggtgtagttgttgagcagcttcactgcaagtatattgtatgtttcgatatccaatatatat

Function

NR:

description
putative lipoyltransferase 2, mitochondrial isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU540859 True 211 lncRNA 0.46 1 13370779 13370989

Neighbor

gene id symbol gene type direction distance location
LOC118965067 NA coding upstream 45984 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 416720 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 444831 12896951 ~ 12925948 (+)
arsk arsk coding upstream 475003 12888485 ~ 12895776 (+)
LOC110525291 LOC106585801 coding upstream 482443 12882604 ~ 12888336 (+)
LOC110525299 LOC106585791 coding downstream 355720 13726709 ~ 13733060 (+)
gig2p LOC106585755 coding downstream 1270743 14641732 ~ 14644594 (+)
LOC110525306 LOC106585757 coding downstream 1320575 14691564 ~ 14706855 (+)
LOC110525102 LOC106585759 coding downstream 1335888 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 1465154 14836143 ~ 14890175 (+)
G475770 NA non-coding upstream 1214 13369366 ~ 13369565 (+)
G475711 NA non-coding upstream 42206 13327994 ~ 13328573 (+)
G475710 NA non-coding upstream 42928 13327652 ~ 13327851 (+)
G475693 NA non-coding upstream 56306 13314121 ~ 13314473 (+)
G475675 NA non-coding upstream 72389 13298098 ~ 13298390 (+)
G475777 NA non-coding downstream 2128 13373117 ~ 13373324 (+)
G475853 NA non-coding downstream 57931 13428920 ~ 13429123 (+)
G475918 NA non-coding downstream 211634 13582623 ~ 13583387 (+)
G476053 NA non-coding downstream 271193 13642182 ~ 13644398 (+)
G476060 NA non-coding downstream 278396 13649385 ~ 13649653 (+)
G475692 NA other upstream 56810 13313679 ~ 13313969 (+)
G474949 NA other upstream 657481 12712306 ~ 12713298 (+)
G474851 NA other upstream 866660 12503760 ~ 12504119 (+)
G474321 NA other upstream 1180207 12188288 ~ 12190572 (+)
G473070 NA other upstream 2091514 11278338 ~ 11279265 (+)
G476234 NA other downstream 613851 13984840 ~ 13985259 (+)
G476248 NA other downstream 626095 13997084 ~ 14015564 (+)
G479239 NA other downstream 2988427 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 3608193 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 3729997 17016096 ~ 17126012 (+)

Expression


Co-expression Network