G475853


Basic Information

Item Value
gene id G475853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 13428920 ~ 13429123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU540957
gcttggagaaaccagctggctgcaccgactccgatagcgtctctccagtgagccatgtttccgtgaagcaaagaacgttacagtctctgatgtccctctggaatgctacccttgctcggatttcatcaaccttgttgtcaagaggctggacattggcgagaagtatgctagggagtggtgcgcgatgtgcccgtctccggagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU540957 True 204 lncRNA 0.54 1 13428920 13429123

Neighbor

gene id symbol gene type direction distance location
LOC118965067 NA coding upstream 104125 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 474861 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 502972 12896951 ~ 12925948 (+)
arsk arsk coding upstream 533144 12888485 ~ 12895776 (+)
LOC110525291 LOC106585801 coding upstream 540584 12882604 ~ 12888336 (+)
LOC110525299 LOC106585791 coding downstream 297586 13726709 ~ 13733060 (+)
gig2p LOC106585755 coding downstream 1212609 14641732 ~ 14644594 (+)
LOC110525306 LOC106585757 coding downstream 1262441 14691564 ~ 14706855 (+)
LOC110525102 LOC106585759 coding downstream 1277754 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 1407020 14836143 ~ 14890175 (+)
G475777 NA non-coding upstream 55596 13373117 ~ 13373324 (+)
G475771 NA non-coding upstream 57931 13370779 ~ 13370989 (+)
G475770 NA non-coding upstream 59355 13369366 ~ 13369565 (+)
G475711 NA non-coding upstream 100347 13327994 ~ 13328573 (+)
G475710 NA non-coding upstream 101069 13327652 ~ 13327851 (+)
G475918 NA non-coding downstream 153500 13582623 ~ 13583387 (+)
G476053 NA non-coding downstream 213059 13642182 ~ 13644398 (+)
G476060 NA non-coding downstream 220262 13649385 ~ 13649653 (+)
G476089 NA non-coding downstream 277936 13707059 ~ 13707298 (+)
G476091 NA non-coding downstream 280696 13709819 ~ 13710025 (+)
G475692 NA other upstream 114951 13313679 ~ 13313969 (+)
G474949 NA other upstream 715622 12712306 ~ 12713298 (+)
G474851 NA other upstream 924801 12503760 ~ 12504119 (+)
G474321 NA other upstream 1238348 12188288 ~ 12190572 (+)
G473070 NA other upstream 2149655 11278338 ~ 11279265 (+)
G476234 NA other downstream 555717 13984840 ~ 13985259 (+)
G476248 NA other downstream 567961 13997084 ~ 14015564 (+)
G479239 NA other downstream 2930293 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 3550059 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 3671863 17016096 ~ 17126012 (+)

Expression


Co-expression Network