G475918


Basic Information

Item Value
gene id G475918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 13582623 ~ 13583387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU541032
tattcattctgaggggttatgtttaggtattaattctgaggggttatgtttaggtaTTAATTCTGAGGGGTTATGTTTACGTATTAATTCTGAGGGGTTATGTTTACGTATTAATTCtgaggggttatgtttaggtattcattctgagggGTTATGTTTACGTATTAATTCtgaggggttatgtttaggtattcattctgagggGTTATGTTTACGTATTAATTCtgaggggttatgtttaggtattaattctgaggggttatgtttaggtaTTAATTCTGAGGGGTTATGTTTACGTATTAATTCTGAGGGGTTATGTTTACGTATTAATTCtgaggggttatgtttaggtaTTAATTCTGAGGGGTTATGTTTACGTATTAATTCTGAGGGGTTATGTTTACGTATTAATTC

Function

NR:

description
PREDICTED: proteoglycan 4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU541032 True 414 lncRNA 0.34 2 13582623 13583387

Neighbor

gene id symbol gene type direction distance location
LOC118965067 NA coding upstream 257828 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 628564 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 656675 12896951 ~ 12925948 (+)
arsk arsk coding upstream 686847 12888485 ~ 12895776 (+)
LOC110525291 LOC106585801 coding upstream 694287 12882604 ~ 12888336 (+)
LOC110525299 LOC106585791 coding downstream 143322 13726709 ~ 13733060 (+)
gig2p LOC106585755 coding downstream 1058345 14641732 ~ 14644594 (+)
LOC110525306 LOC106585757 coding downstream 1108177 14691564 ~ 14706855 (+)
LOC110525102 LOC106585759 coding downstream 1123490 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 1252756 14836143 ~ 14890175 (+)
G475853 NA non-coding upstream 153500 13428920 ~ 13429123 (+)
G475777 NA non-coding upstream 209299 13373117 ~ 13373324 (+)
G475771 NA non-coding upstream 211634 13370779 ~ 13370989 (+)
G475770 NA non-coding upstream 213058 13369366 ~ 13369565 (+)
G475711 NA non-coding upstream 254050 13327994 ~ 13328573 (+)
G476053 NA non-coding downstream 58795 13642182 ~ 13644398 (+)
G476060 NA non-coding downstream 65998 13649385 ~ 13649653 (+)
G476089 NA non-coding downstream 123672 13707059 ~ 13707298 (+)
G476091 NA non-coding downstream 126432 13709819 ~ 13710025 (+)
G476095 NA non-coding downstream 131794 13715181 ~ 13715416 (+)
G475692 NA other upstream 268654 13313679 ~ 13313969 (+)
G474949 NA other upstream 869325 12712306 ~ 12713298 (+)
G474851 NA other upstream 1078504 12503760 ~ 12504119 (+)
G474321 NA other upstream 1392051 12188288 ~ 12190572 (+)
G473070 NA other upstream 2303358 11278338 ~ 11279265 (+)
G476234 NA other downstream 401453 13984840 ~ 13985259 (+)
G476248 NA other downstream 413697 13997084 ~ 14015564 (+)
G479239 NA other downstream 2776029 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 3395795 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 3517599 17016096 ~ 17126012 (+)

Expression


Co-expression Network