G476053


Basic Information

Item Value
gene id G476053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 13642182 ~ 13644398 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU541186
ATCTATTCCCAGCAAACATCTACTGTATATCCAGCCTTTATCTATACCCAACCAGTATCTGTACCCAGCCAGTATCTGTACCCAGCCAGAATCTATACCCAGCCAGTATCTATACCCAGCCAGAATCTATACCCAGCCAGAATCTATACCCAGCCAGTATCTATACCCAGCCAGTGTCAATACCCAGCCAGTATCTATACCCAGGCAGTGTCTATAACCATTCAGTGTCTATACACATTCAGCATCTATACCCAGCTAGCGTCTATGCCCTGCCAGTATCTATACCCAGCCAGTATCTGTACCCAGCCTGTGTCTATACCCAGCCAGTATCTACTGTATACCCAGCCAGTATCTATACCCAGGCAGTATCTATACCCAGCCAGTATCTACTGTATACCCAGCCAGTATCTATACCCAGCCAGTATCTATACCCAGCCAGTATCTATACCCAGCCAGTATctataaccagccagtatctatACCCAGCCAGTATCTGTAACCAGCCTGTGTctataaccagccagtatctatACCCAGCCAGTATCTATACCCAGCCAGAATCTATACCC

Function

NR:

description
PREDICTED: foot protein 1 variant 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU541186 True 569 lncRNA 0.47 2 13642182 13644398

Neighbor

gene id symbol gene type direction distance location
LOC118965067 NA coding upstream 317387 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 688123 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 716234 12896951 ~ 12925948 (+)
arsk arsk coding upstream 746406 12888485 ~ 12895776 (+)
LOC110525291 LOC106585801 coding upstream 753846 12882604 ~ 12888336 (+)
LOC110525299 LOC106585791 coding downstream 82311 13726709 ~ 13733060 (+)
gig2p LOC106585755 coding downstream 997334 14641732 ~ 14644594 (+)
LOC110525306 LOC106585757 coding downstream 1047166 14691564 ~ 14706855 (+)
LOC110525102 LOC106585759 coding downstream 1062479 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 1191745 14836143 ~ 14890175 (+)
G475918 NA non-coding upstream 58795 13582623 ~ 13583387 (+)
G475853 NA non-coding upstream 213059 13428920 ~ 13429123 (+)
G475777 NA non-coding upstream 268858 13373117 ~ 13373324 (+)
G475771 NA non-coding upstream 271193 13370779 ~ 13370989 (+)
G475770 NA non-coding upstream 272617 13369366 ~ 13369565 (+)
G476060 NA non-coding downstream 4987 13649385 ~ 13649653 (+)
G476089 NA non-coding downstream 62661 13707059 ~ 13707298 (+)
G476091 NA non-coding downstream 65421 13709819 ~ 13710025 (+)
G476095 NA non-coding downstream 70783 13715181 ~ 13715416 (+)
G476096 NA non-coding downstream 71109 13715507 ~ 13715722 (+)
G475692 NA other upstream 328213 13313679 ~ 13313969 (+)
G474949 NA other upstream 928884 12712306 ~ 12713298 (+)
G474851 NA other upstream 1138063 12503760 ~ 12504119 (+)
G474321 NA other upstream 1451610 12188288 ~ 12190572 (+)
G473070 NA other upstream 2362917 11278338 ~ 11279265 (+)
G476234 NA other downstream 340442 13984840 ~ 13985259 (+)
G476248 NA other downstream 352686 13997084 ~ 14015564 (+)
G479239 NA other downstream 2715018 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 3334784 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 3456588 17016096 ~ 17126012 (+)

Expression


Co-expression Network