G476230 (LOC106573797)


Basic Information

Item Value
gene id G476230
gene name LOC106573797
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 13982109 ~ 13982385 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU541375
tgactctgaaaaacaccaaaataaagatgcccagggtccctgctcatctgcgtgaacgcgccttaggcatgctgcaaagaggcatgaggaccgcagatgtggccagggaaataaatggcaatgtccgtactgtgagatgcctaagacagtgctacagggagacaggatggacagctgatcgtcctcgcagtggcagaccacatgtaacaacacctgcacaggatcggtacatctgaacatcacactagcgggacaggtacaggacagcaatgactgc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106573797, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU541375 True 277 lncRNA 0.52 1 13982109 13982385

Neighbor

gene id symbol gene type direction distance location
LOC110525299 LOC106585791 coding upstream 249049 13726709 ~ 13733060 (+)
LOC118965067 NA coding upstream 657314 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 1028050 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 1056161 12896951 ~ 12925948 (+)
arsk arsk coding upstream 1086333 12888485 ~ 12895776 (+)
gig2p LOC106585755 coding downstream 659347 14641732 ~ 14644594 (+)
LOC110525306 LOC106585757 coding downstream 709179 14691564 ~ 14706855 (+)
LOC110525102 LOC106585759 coding downstream 724492 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 853758 14836143 ~ 14890175 (+)
LOC110525309 LOC106585763 coding downstream 987105 14969490 ~ 14995677 (+)
G476229 NA non-coding upstream 1207 13980476 ~ 13980902 (+)
G476228 NA non-coding upstream 2253 13979623 ~ 13979856 (+)
G476225 NA non-coding upstream 4269 13977005 ~ 13977840 (+)
G476223 NA non-coding upstream 9872 13971829 ~ 13972237 (+)
G476219 NA non-coding upstream 15399 13966424 ~ 13966710 (+)
G476237 NA non-coding downstream 5282 13987667 ~ 13988008 (+)
G476240 NA non-coding downstream 7541 13989926 ~ 13990155 (+)
G476241 NA non-coding downstream 7866 13990251 ~ 13990536 (+)
G476256 NA non-coding downstream 22114 14004499 ~ 14004779 (+)
G476313 NA non-coding downstream 92335 14074720 ~ 14081890 (+)
G475692 NA other upstream 668140 13313679 ~ 13313969 (+)
G474949 NA other upstream 1268811 12712306 ~ 12713298 (+)
G474851 NA other upstream 1477990 12503760 ~ 12504119 (+)
G474321 NA other upstream 1791537 12188288 ~ 12190572 (+)
G473070 NA other upstream 2702844 11278338 ~ 11279265 (+)
G476234 NA other downstream 2455 13984840 ~ 13985259 (+)
G476248 NA other downstream 14699 13997084 ~ 14015564 (+)
G479239 NA other downstream 2377031 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 2996797 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 3118601 17016096 ~ 17126012 (+)

Expression


Co-expression Network