G476241


Basic Information

Item Value
gene id G476241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 13990251 ~ 13990536 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU541386
cccaacgtgaagcatggaggaggaggtgtgatggtgctttgctgttaacactgtcagtgatttatttagaattcaaggcacacttaaccagcatggctaccacagcattctgcagtgatacgtcatgtgctgcatcagatgacctggcctccacaatcatctgacctcaacccaattgagatggtttgggatgagttggaatgcAGATTGAAGGAAACATAGCTAACAAGTGCTcctcatatgtgggaactccttccaagactgttggaaaagcattccacatgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU541386 True 286 lncRNA 0.46 1 13990251 13990536

Neighbor

gene id symbol gene type direction distance location
LOC110525299 LOC106585791 coding upstream 257191 13726709 ~ 13733060 (+)
LOC118965067 NA coding upstream 665456 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 1036192 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 1064303 12896951 ~ 12925948 (+)
arsk arsk coding upstream 1094475 12888485 ~ 12895776 (+)
gig2p LOC106585755 coding downstream 651196 14641732 ~ 14644594 (+)
LOC110525306 LOC106585757 coding downstream 701028 14691564 ~ 14706855 (+)
LOC110525102 LOC106585759 coding downstream 716341 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 845607 14836143 ~ 14890175 (+)
LOC110525309 LOC106585763 coding downstream 978954 14969490 ~ 14995677 (+)
G476240 NA non-coding upstream 96 13989926 ~ 13990155 (+)
G476237 NA non-coding upstream 2243 13987667 ~ 13988008 (+)
G476230 LOC106573797 non-coding upstream 7866 13982109 ~ 13982385 (+)
G476229 NA non-coding upstream 9349 13980476 ~ 13980902 (+)
G476228 NA non-coding upstream 10395 13979623 ~ 13979856 (+)
G476256 NA non-coding downstream 13963 14004499 ~ 14004779 (+)
G476313 NA non-coding downstream 84184 14074720 ~ 14081890 (+)
G476584 NA non-coding downstream 119227 14109763 ~ 14109983 (+)
G476586 NA non-coding downstream 122161 14112697 ~ 14114841 (+)
G476603 NA non-coding downstream 138459 14128995 ~ 14129356 (+)
G476234 NA other upstream 4992 13984840 ~ 13985259 (+)
G475692 NA other upstream 676282 13313679 ~ 13313969 (+)
G474949 NA other upstream 1276953 12712306 ~ 12713298 (+)
G474851 NA other upstream 1486132 12503760 ~ 12504119 (+)
G474321 NA other upstream 1799679 12188288 ~ 12190572 (+)
G476248 NA other downstream 6548 13997084 ~ 14015564 (+)
G479239 NA other downstream 2368880 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 2988646 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 3110450 17016096 ~ 17126012 (+)
G480128 NA other downstream 3330238 17320774 ~ 17321165 (+)

Expression


Co-expression Network