G476586



Basic Information


Item Value
gene id G476586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 14112697 ~ 14114841 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU541776
TACCCTTACCTCTACCCTTACCtctacctttaccttaacccttacctctacccttacctttacccttaccttaacccttacctctacccttacctttacccttaCATCTACCCTTATCTCTACCCTTACATCTACCCTTACCTTAACATctacCCCTTACTTTACCCTTACATCtacccttacctttacccttaccGTAACCCTTACATCtacccttacctttacccttacctttacccttacctttacccttacctCTACCCTTATCTTtacccttacctttacccttacctctacccttacctctacccttacctttacccttaCATCTACCCTTACCTCTACCCTTACCGTAACCCTTACATCtacccttacctttacccttacctttacccttacctttacccttacctctacccttacctttacccttacctttacccttacctctacccttacctctacccttacctttacccttacatctacccttacctctacccttacctttacccttacatctacccttacctctacccttacctttacccttacctctacccttacctttacccttacctctacccttacctttacccttGCCTCTACCCTTACCTCTACCCTTACCCTCtacccttacctttacccttaCATCTACCCTTACCTCTACCCTTACATCTACCCTTGCCTTTACCCTTACCTCTACCCTTACATCtacccttacctttacccttaCATCTACCCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU541776 True 745 lncRNA 0.45 2 14112697 14114841

Neighbor


gene id symbol gene type direction distance location
LOC110525299 LOC106585791 coding upstream 379637 13726709 ~ 13733060 (+)
LOC118965067 NA coding upstream 787902 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 1158638 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 1186749 12896951 ~ 12925948 (+)
arsk arsk coding upstream 1216921 12888485 ~ 12895776 (+)
gig2p LOC106585755 coding downstream 526891 14641732 ~ 14644594 (+)
LOC110525306 LOC106585757 coding downstream 576723 14691564 ~ 14706855 (+)
LOC110525102 LOC106585759 coding downstream 592036 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 721302 14836143 ~ 14890175 (+)
LOC110525309 LOC106585763 coding downstream 854649 14969490 ~ 14995677 (+)
G476584 NA non-coding upstream 2714 14109763 ~ 14109983 (+)
G476313 NA non-coding upstream 30807 14074720 ~ 14081890 (+)
G476256 NA non-coding upstream 107918 14004499 ~ 14004779 (+)
G476241 NA non-coding upstream 122161 13990251 ~ 13990536 (+)
G476240 NA non-coding upstream 122542 13989926 ~ 13990155 (+)
G476603 NA non-coding downstream 14154 14128995 ~ 14129356 (+)
G476620 NA non-coding downstream 39844 14154685 ~ 14155530 (+)
G476627 NA non-coding downstream 45849 14160690 ~ 14160947 (+)
G476663 NA non-coding downstream 98446 14213287 ~ 14217700 (+)
G476738 NA non-coding downstream 171720 14286561 ~ 14286774 (+)
G476248 NA other upstream 97133 13997084 ~ 14015564 (+)
G476234 NA other upstream 127438 13984840 ~ 13985259 (+)
G475692 NA other upstream 798728 13313679 ~ 13313969 (+)
G474949 NA other upstream 1399399 12712306 ~ 12713298 (+)
G474851 NA other upstream 1608578 12503760 ~ 12504119 (+)
G479239 NA other downstream 2244575 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 2864341 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 2986145 17016096 ~ 17126012 (+)
G480128 NA other downstream 3205933 17320774 ~ 17321165 (+)
G480219 NA other downstream 3329912 17444753 ~ 17445931 (+)

Expression



Co-expression Network