G476980


Basic Information

Item Value
gene id G476980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 14636021 ~ 14636229 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU542204
ACTCAAGACTGTATACcccgatgaagacagcttggctgtcgaaaacgttggtaattaaattgttgcatctgagctcctagagtgtgcggctctcttttattttcaagttttctactccgctagccagcacctcgcctaaataggtgtgcgtttcttttttttctacactACTCAAGACTGTAACCTAAACCATGAATGAATGGTACCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU542204 True 209 lncRNA 0.43 1 14636021 14636229

Neighbor

gene id symbol gene type direction distance location
LOC110525299 LOC106585791 coding upstream 902961 13726709 ~ 13733060 (+)
LOC118965067 NA coding upstream 1311226 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 1681962 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 1710073 12896951 ~ 12925948 (+)
arsk arsk coding upstream 1740245 12888485 ~ 12895776 (+)
gig2p LOC106585755 coding downstream 5503 14641732 ~ 14644594 (+)
LOC110525306 LOC106585757 coding downstream 55335 14691564 ~ 14706855 (+)
LOC110525102 LOC106585759 coding downstream 70648 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 199914 14836143 ~ 14890175 (+)
LOC110525309 LOC106585763 coding downstream 333261 14969490 ~ 14995677 (+)
G476943 NA non-coding upstream 47761 14570132 ~ 14588260 (+)
G476861 NA non-coding upstream 194654 14439451 ~ 14441367 (+)
G476826 NA non-coding upstream 259036 14376702 ~ 14376985 (+)
G476825 NA non-coding upstream 267423 14366402 ~ 14368598 (+)
G476823 NA non-coding upstream 272823 14361850 ~ 14363198 (+)
G476995 NA non-coding downstream 38719 14674948 ~ 14707249 (+)
G477008 NA non-coding downstream 40896 14677125 ~ 14680573 (+)
G477365 NA non-coding downstream 182013 14818242 ~ 14819574 (+)
G477386 NA non-coding downstream 233421 14869650 ~ 14872190 (+)
G477404 NA non-coding downstream 261282 14897511 ~ 14897949 (+)
G476248 NA other upstream 620457 13997084 ~ 14015564 (+)
G476234 NA other upstream 650762 13984840 ~ 13985259 (+)
G475692 NA other upstream 1322052 13313679 ~ 13313969 (+)
G474949 NA other upstream 1922723 12712306 ~ 12713298 (+)
G474851 NA other upstream 2131902 12503760 ~ 12504119 (+)
G479239 NA other downstream 1723187 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 2342953 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 2464757 17016096 ~ 17126012 (+)
G480128 NA other downstream 2684545 17320774 ~ 17321165 (+)
G480219 NA other downstream 2808524 17444753 ~ 17445931 (+)

Expression


Co-expression Network