G477386


Basic Information

Item Value
gene id G477386
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 14869650 ~ 14872190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU542656
gtcacgttctgacctttatttcctttgttttgtatttatttagtatggtcagggcgtgagttgggtgggcagtctatgtttgtttttctatgttttggggtatttctatgtttcagcctagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggtttcactgtgtgtttgtggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU542656 True 210 lncRNA 0.41 2 14869650 14872190

Neighbor

gene id symbol gene type direction distance location
LOC110525102 LOC106585759 coding upstream 150917 14706877 ~ 14718733 (+)
LOC110525306 LOC106585757 coding upstream 162795 14691564 ~ 14706855 (+)
gig2p LOC106585755 coding upstream 225056 14641732 ~ 14644594 (+)
LOC110525299 LOC106585791 coding upstream 1136590 13726709 ~ 13733060 (+)
LOC118965067 NA coding upstream 1544855 13322042 ~ 13324795 (+)
LOC110525309 LOC106585763 coding downstream 97300 14969490 ~ 14995677 (+)
LOC110525312 NA coding downstream 855307 15727497 ~ 15730287 (+)
LOC110525007 NA coding downstream 945260 15817450 ~ 15821090 (+)
LOC110525313 LOC106585767 coding downstream 960310 15832500 ~ 15883790 (+)
LOC118964846 NA coding downstream 1296205 16168395 ~ 16175015 (+)
G477365 NA non-coding upstream 50076 14818242 ~ 14819574 (+)
G476995 NA non-coding upstream 162401 14674948 ~ 14707249 (+)
G477008 NA non-coding upstream 189077 14677125 ~ 14680573 (+)
G476980 NA non-coding upstream 233421 14636021 ~ 14636229 (+)
G476943 NA non-coding upstream 281390 14570132 ~ 14588260 (+)
G477404 NA non-coding downstream 25321 14897511 ~ 14897949 (+)
G477405 NA non-coding downstream 26924 14899114 ~ 14899315 (+)
G477407 NA non-coding downstream 29998 14902188 ~ 14902584 (+)
G477409 NA non-coding downstream 33944 14906134 ~ 14906437 (+)
G477549 NA non-coding downstream 126304 14998494 ~ 14998883 (+)
G476248 NA other upstream 854086 13997084 ~ 14015564 (+)
G476234 NA other upstream 884391 13984840 ~ 13985259 (+)
G475692 NA other upstream 1555681 13313679 ~ 13313969 (+)
G474949 NA other upstream 2156352 12712306 ~ 12713298 (+)
G474851 NA other upstream 2365531 12503760 ~ 12504119 (+)
G479239 NA other downstream 1487226 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 2106992 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 2228796 17016096 ~ 17126012 (+)
G480128 NA other downstream 2448584 17320774 ~ 17321165 (+)
G480219 NA other downstream 2572563 17444753 ~ 17445931 (+)

Expression


Co-expression Network