G477404


Basic Information

Item Value
gene id G477404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 14897511 ~ 14897949 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU542677
tatccagttgcagagggaggtgtttagtcccagggtccttagcttagtgatgagctttctaggcactatggtgttgaacgctgagctgtagtcaatgaacagcattcttacataggtgttccttttgtccaggtgggaaaggacagtgtggagtgctgttgagattgtgtcatctaaGGATCCTTCCGGTGaaatgcgaattggagtgggtctagggttcctggatgatggtgttgatgtgagccatgactagcctttcaaagcacttcatgcctacagtggcttgcaaaagtattcacccccttggcgtttttcctattttgttgccttgcaacctggaattaaaatagattttttggggggttgtatcattttatttacacaacatgcctaccactttgaagatgcaaaatattttttattgtgtatCAAACAATAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU542677 True 439 lncRNA 0.43 1 14897511 14897949

Neighbor

gene id symbol gene type direction distance location
LOC110525103 LOC106585761 coding upstream 7336 14836143 ~ 14890175 (+)
LOC110525102 LOC106585759 coding upstream 178778 14706877 ~ 14718733 (+)
LOC110525306 LOC106585757 coding upstream 190656 14691564 ~ 14706855 (+)
gig2p LOC106585755 coding upstream 252917 14641732 ~ 14644594 (+)
LOC110525299 LOC106585791 coding upstream 1164451 13726709 ~ 13733060 (+)
LOC110525309 LOC106585763 coding downstream 71541 14969490 ~ 14995677 (+)
LOC110525312 NA coding downstream 829548 15727497 ~ 15730287 (+)
LOC110525007 NA coding downstream 919501 15817450 ~ 15821090 (+)
LOC110525313 LOC106585767 coding downstream 934551 15832500 ~ 15883790 (+)
LOC118964846 NA coding downstream 1270446 16168395 ~ 16175015 (+)
G477386 NA non-coding upstream 25321 14869650 ~ 14872190 (+)
G477365 NA non-coding upstream 77937 14818242 ~ 14819574 (+)
G476995 NA non-coding upstream 190262 14674948 ~ 14707249 (+)
G477008 NA non-coding upstream 216938 14677125 ~ 14680573 (+)
G476980 NA non-coding upstream 261282 14636021 ~ 14636229 (+)
G477405 NA non-coding downstream 1165 14899114 ~ 14899315 (+)
G477407 NA non-coding downstream 4239 14902188 ~ 14902584 (+)
G477409 NA non-coding downstream 8185 14906134 ~ 14906437 (+)
G477549 NA non-coding downstream 100545 14998494 ~ 14998883 (+)
G477552 NA non-coding downstream 103165 15001114 ~ 15073502 (+)
G476248 NA other upstream 881947 13997084 ~ 14015564 (+)
G476234 NA other upstream 912252 13984840 ~ 13985259 (+)
G475692 NA other upstream 1583542 13313679 ~ 13313969 (+)
G474949 NA other upstream 2184213 12712306 ~ 12713298 (+)
G474851 NA other upstream 2393392 12503760 ~ 12504119 (+)
G479239 NA other downstream 1461467 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 2081233 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 2203037 17016096 ~ 17126012 (+)
G480128 NA other downstream 2422825 17320774 ~ 17321165 (+)
G480219 NA other downstream 2546804 17444753 ~ 17445931 (+)

Expression


Co-expression Network