G477528 (LOC106585763)


Basic Information

Item Value
gene id G477528
gene name LOC106585763
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 14954093 ~ 14956050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU542805
GTGAGAGCTGAGCTTGTCTCTGTAACAGGAATAGATGAAGGTTTTTCTGAGCCTCCCAGTTTCTCAACCTGCTCTCTAACTGCACTCTCTGCCGTTTCATATGACACTGTGGTAGTAATTACTGGTTTCTCAGTGCTATAAAAATAAGACACTCTGGGAATTGCAGTGTCTTTGGTGTAAATCTCACTTGTCAGGTCACCTGAGGTCACTGTCGAGGATAGGGTTGAGCTTGCCTCAGTCACTTGAGTATCCACATTAGCTCCACTAGAAACAGCTGGGCTGAAAGTCACAGAAGGTGAGACTGTTGGTGACACATCAACTTTTTTACTGGGTTCAATGCTTGATGATAATGTTGATTTCTCATCCTCCATTTTGCTCATGCTGAACATAGGAGTTGCTGTTGTCACAAGAGACTCCTTAGTGGACATCGGAGAAATCTCATCTTCATCTGTAGGGGTGACGGCTGTGCTAGTCTTTGTGTCATCACTAATCGGAGTAGCTGATGGTTTCTCTGTTTGCTCTGTAGCCTCACTGGTTGCTATTGAGCTTGTGGTCACATCATGttctgttttgactgtactataaAGAGGAGAGAGCGGTGTTGCAGTAGATGTGCTAGTAAAGATACTCGAGTCACCTGAACTTTCTTCCTCCGTAATAGTTGGGGTAACTGAAGGTTTATCTTTGCTTGTGGTCTCTTCATCTTGTTTAGGTACCTCACTTGTCAGAATTGTGCCCTGTGTGGTGTATCGGCTGACTAAGTCTGAGAGAGTTGCCATGGTTGTCTTAATCATCTGAATAGTATTATATATTGGAGTTGTTGAAGGAAATTCTTTGCTGGACATTGGAGATATTGCCAGACTCTCAGAACCCTCTTCATCTGAAGTTGTCTCAGTCTCATCAATGACAGGAACAACTAATGGTTTCTCTGTGCCTGTTCGGTCTTTGGTCGGTGCTGTTATCTCACTTTCCTGTGTAGTGTCTGCTGAGCTTGTTCTTGGTAACGTTGTTGTGGATCCTAACAAGATCTGTTCCATGTTGGATGATGGAGAGCTGGTTGTGAACATATCAGGAGTGTGGTCTCCTGTGGTCTCCTGCTCTGGTGTGGAAACCATATGCGCTGCAGTCGTGTCTTTCACGGTGGGAGACACAAGAGGCTGGCTAACTGTTGTTCCCTCTTTCTGGCTTGTCAAAAATTCAGCAGTGGTAGAGCTCAAGGAATGAGATTTCGTGCTGCCTGCCTCTTTGGATGGCGTCACCTCAGTCGTGATTGTTTCTCCTAAAGTTGTTTGGGCACTTGTTGTTAAGGAAGGCAGAGTGGTGCTGGTTGGTtcctgaggagtgtgtgtgtcctgtgctgATCCTTCCTCCTCGCCTGAGGTGGAGCCCTCAATGTCACTGGGGGTCGCTGGCGGTGAGCCATCTTCAACATCAACAGAAGTGGGTGTAGGGACGGACAGTAAAGGGGTTTGAGTGGAGATTACAACATCTGGAACTGCAGAGGTGCTCTTTGTTCCTTCTGCAATTTCAGGCGCATCTGTGGACACGTGCAGTTCagttgtgggagagagagagagctcttccACAGACCCTTCTGGCTGAGTCACCTCAGCATTACTGTCATCATCCGGGGGTTGTGTCTCTGATCCCTCCACCTCTTTGTCAAACAcagaggtgctgacttgctggcTTCCTTCAGGGGGTGTGGGTGTATGAGATGTTTGGGTTTGTTCTGACGCTTTGGTTACTGCTGTGCCAGATGGTGAAACAGTGGACACTGCTTCAGTGGACGTAGTTATGATGTCACTTGGTCCCTCTCTGGTTTCTGAAAAAGATGATACACCCTTGGCTGTTTGCTCTGTTTTGGATGGGGTGGTTTCCACAATTGTTGTGACAGGTGCAGAGGTTGCAGTCACTTCTGTCTTTACAGCAGGGCCTTGTGCGGTTTCCTCAACCTG

Function

NR:

description
uncharacterized protein LOC110525104

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU542805 True 1958 TUCP 0.47 1 14954093 14956050
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110525308 LOC106585762 coding downstream 127897 14817061 ~ 14826196 (-)
LOC118964843 LOC104929280 coding downstream 181057 14770144 ~ 14773036 (-)
ttc37 ttc37 coding downstream 270548 14646569 ~ 14683545 (-)
LOC110525302 LOC106580145 coding downstream 328771 14375775 ~ 14625322 (-)
fam172a LOC106585793 coding downstream 866347 13758198 ~ 14087746 (-)
LOC110525310 LOC106585764 coding upstream 45057 15001107 ~ 15025251 (-)
LOC110525311 LOC106585765 coding upstream 237837 15193887 ~ 15388934 (-)
LOC118964844 ccnh coding upstream 928332 15884382 ~ 15887184 (-)
LOC118964845 NA coding upstream 931378 15887428 ~ 15889529 (-)
LOC118965068 NA coding upstream 942569 15898619 ~ 15900720 (-)
G477527 LOC106585763 non-coding downstream 209 14953666 ~ 14953884 (-)
G477450 NA non-coding downstream 126346 14827520 ~ 14827747 (-)
G477449 NA non-coding downstream 126664 14827175 ~ 14827429 (-)
G477441 NA non-coding downstream 143295 14810588 ~ 14810798 (-)
G477529 NA non-coding upstream 77 14956127 ~ 14956813 (-)
G477530 NA non-coding upstream 905 14956955 ~ 14957166 (-)
G477531 LOC106585763 non-coding upstream 6868 14962918 ~ 14969684 (-)
G477534 NA non-coding upstream 17548 14973598 ~ 14974102 (-)
G477536 NA non-coding upstream 27504 14983554 ~ 14983782 (-)
G475573 NA other downstream 1756081 13197315 ~ 13198012 (-)
LOC110525296 arrdc3 other downstream 1907832 13026299 ~ 13046348 (-)
G475413 NA other downstream 2000042 12952252 ~ 12954051 (-)
LOC110525279 LOC106585809 other downstream 2528858 12310179 ~ 12555360 (-)
G478643 NA other upstream 771440 15727490 ~ 15730279 (-)
G478730 LOC106585767 other upstream 913749 15869799 ~ 15871798 (-)
G478734 NA other upstream 925586 15881636 ~ 15883510 (-)
LOC110525318 rxra other upstream 1605340 16538121 ~ 16574149 (-)
G479533 NA other upstream 1633222 16589272 ~ 16593771 (-)

Expression

G477528(LOC106585763) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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G477528(LOC106585763) Expression in each Bioproject

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G477528(LOC106585763) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 5.
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Co-expression Network