Gene
RNA
| Item | Value |
|---|---|
| gene id | G479091 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 16151264 ~ 16220121 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU544490 | True | 445 | lncRNA | 0.36 | 2 | 16151264 | 16220121 |
16,140,000
16,150,000
16,160,000
16,170,000
16,180,000
16,190,000
16,200,000
16,210,000
16,220,000
16,230,000
16,240,000
16,250,000
16,260,000
16,270,000
16,280,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525314 | LOC106585770 | coding | downstream | 102330 | 16017955 ~ 16048934 (-) |
| LOC118965069 | NA | coding | downstream | 228162 | 15921001 ~ 15923102 (-) |
| LOC110525008 | NA | coding | downstream | 239353 | 15909810 ~ 15911911 (-) |
| LOC118965068 | NA | coding | downstream | 250544 | 15898619 ~ 15900720 (-) |
| LOC118964845 | NA | coding | downstream | 261735 | 15887428 ~ 15889529 (-) |
| LOC110525318 | rxra | coding | upstream | 318000 | 16538121 ~ 16574149 (-) |
| LOC110525321 | cssa24h9orf116 | coding | upstream | 465672 | 16685793 ~ 16694405 (-) |
| LOC110525322 | LOC106585778 | coding | upstream | 487135 | 16707256 ~ 16730072 (-) |
| LOC110525323 | stkld1 | coding | upstream | 510668 | 16730789 ~ 16739097 (-) |
| endog | endog | coding | upstream | 913719 | 17133840 ~ 17135672 (-) |
| G479055 | NA | non-coding | downstream | 80065 | 16070975 ~ 16071199 (-) |
| G479051 | NA | non-coding | downstream | 88403 | 16062642 ~ 16062861 (-) |
| G479050 | NA | non-coding | downstream | 88983 | 16062027 ~ 16062281 (-) |
| G479044 | NA | non-coding | downstream | 93686 | 16057317 ~ 16057578 (-) |
| G479040 | NA | non-coding | downstream | 97576 | 16053446 ~ 16053688 (-) |
| G479150 | NA | non-coding | upstream | 39515 | 16259636 ~ 16260150 (-) |
| G479236 | NA | non-coding | upstream | 137660 | 16357781 ~ 16358043 (-) |
| G479262 | NA | non-coding | upstream | 161080 | 16381201 ~ 16381414 (-) |
| G479267 | NA | non-coding | upstream | 164596 | 16384717 ~ 16385425 (-) |
| G479288 | NA | non-coding | upstream | 181709 | 16401830 ~ 16402129 (-) |
| G478734 | NA | other | downstream | 267754 | 15881636 ~ 15883510 (-) |
| G478730 | LOC106585767 | other | downstream | 279466 | 15869799 ~ 15871798 (-) |
| G478643 | NA | other | downstream | 421681 | 15727490 ~ 15730279 (-) |
| G477528 | LOC106585763 | other | downstream | 1195214 | 14954093 ~ 14956050 (-) |
| fam172a | LOC106585793 | other | downstream | 2063583 | 13758198 ~ 14087746 (-) |
| G479533 | NA | other | upstream | 369151 | 16589272 ~ 16593771 (-) |
| git2a | LOC106585671 | other | upstream | 1837090 | 18056651 ~ 18084926 (-) |
| LOC110525370 | LOC106585675 | other | upstream | 1903976 | 18121017 ~ 18139654 (-) |
| G482323 | NA | other | upstream | 2737365 | 18957486 ~ 18963891 (-) |
