Gene
RNA
| Item | Value |
|---|---|
| gene id | G479150 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 16259636 ~ 16260150 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_03027 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU544552 | True | 449 | lncRNA | 0.44 | 2 | 16259636 | 16260150 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525316 | NA | coding | downstream | 90112 | 16085395 ~ 16169524 (-) |
| LOC110525314 | LOC106585770 | coding | downstream | 210702 | 16017955 ~ 16048934 (-) |
| LOC118965069 | NA | coding | downstream | 336534 | 15921001 ~ 15923102 (-) |
| LOC110525008 | NA | coding | downstream | 347725 | 15909810 ~ 15911911 (-) |
| LOC118965068 | NA | coding | downstream | 358916 | 15898619 ~ 15900720 (-) |
| LOC110525318 | rxra | coding | upstream | 277971 | 16538121 ~ 16574149 (-) |
| LOC110525321 | cssa24h9orf116 | coding | upstream | 425643 | 16685793 ~ 16694405 (-) |
| LOC110525322 | LOC106585778 | coding | upstream | 447106 | 16707256 ~ 16730072 (-) |
| LOC110525323 | stkld1 | coding | upstream | 470639 | 16730789 ~ 16739097 (-) |
| endog | endog | coding | upstream | 873690 | 17133840 ~ 17135672 (-) |
| G479091 | NA | non-coding | downstream | 39515 | 16151264 ~ 16220121 (-) |
| G479095 | NA | non-coding | downstream | 42635 | 16164456 ~ 16217001 (-) |
| G479055 | NA | non-coding | downstream | 188437 | 16070975 ~ 16071199 (-) |
| G479051 | NA | non-coding | downstream | 196775 | 16062642 ~ 16062861 (-) |
| G479236 | NA | non-coding | upstream | 97631 | 16357781 ~ 16358043 (-) |
| G479262 | NA | non-coding | upstream | 121051 | 16381201 ~ 16381414 (-) |
| G479267 | NA | non-coding | upstream | 124567 | 16384717 ~ 16385425 (-) |
| G479288 | NA | non-coding | upstream | 141680 | 16401830 ~ 16402129 (-) |
| G479326 | NA | non-coding | upstream | 176689 | 16436839 ~ 16437068 (-) |
| G478734 | NA | other | downstream | 376126 | 15881636 ~ 15883510 (-) |
| G478730 | LOC106585767 | other | downstream | 387838 | 15869799 ~ 15871798 (-) |
| G478643 | NA | other | downstream | 530053 | 15727490 ~ 15730279 (-) |
| G477528 | LOC106585763 | other | downstream | 1303586 | 14954093 ~ 14956050 (-) |
| fam172a | LOC106585793 | other | downstream | 2171955 | 13758198 ~ 14087746 (-) |
| G479533 | NA | other | upstream | 329122 | 16589272 ~ 16593771 (-) |
| git2a | LOC106585671 | other | upstream | 1797061 | 18056651 ~ 18084926 (-) |
| LOC110525370 | LOC106585675 | other | upstream | 1863947 | 18121017 ~ 18139654 (-) |
| G482323 | NA | other | upstream | 2697336 | 18957486 ~ 18963891 (-) |
