Gene
RNA
| Item | Value |
|---|---|
| gene id | G479966 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 17097964 ~ 17098959 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU545453 | False | 478 | lncRNA | 0.40 | 2 | 17097964 | 17098775 |
| TU545454 | True | 540 | lncRNA | 0.39 | 3 | 17097964 | 17098959 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| phf19 | LOC106585785 | coding | upstream | 94731 | 16983816 ~ 17003233 (+) |
| traf1 | LOC106585784 | coding | upstream | 115713 | 16970834 ~ 16982251 (+) |
| fibcd1 | LOC106585783 | coding | upstream | 131777 | 16846746 ~ 16966187 (+) |
| LOC110525325 | LOC106585782 | coding | upstream | 324396 | 16769390 ~ 16773568 (+) |
| slc2a6 | slc2a6 | coding | upstream | 335641 | 16751007 ~ 16762323 (+) |
| LOC118964847 | NA | coding | downstream | 27996 | 17126955 ~ 17131300 (+) |
| med27 | med27 | coding | downstream | 126606 | 17225565 ~ 17318854 (+) |
| LOC110525335 | LOC106585645 | coding | downstream | 261793 | 17360752 ~ 17412856 (+) |
| LOC110525341 | LOC106585648 | coding | downstream | 389629 | 17488588 ~ 17496137 (+) |
| LOC110525345 | NA | coding | downstream | 427339 | 17526298 ~ 17534335 (+) |
| G479823 | NA | non-coding | upstream | 127572 | 16969569 ~ 16970392 (+) |
| G479897 | NA | non-coding | upstream | 130986 | 16966740 ~ 16966978 (+) |
| G479896 | NA | non-coding | upstream | 131262 | 16966366 ~ 16966702 (+) |
| G479841 | NA | non-coding | upstream | 234041 | 16861345 ~ 16863923 (+) |
| G479678 | NA | non-coding | upstream | 367172 | 16730340 ~ 16730792 (+) |
| G480058 | NA | non-coding | downstream | 220091 | 17319050 ~ 17319198 (+) |
| G480126 | NA | non-coding | downstream | 221076 | 17320035 ~ 17320254 (+) |
| G480134 | NA | non-coding | downstream | 224746 | 17323705 ~ 17323942 (+) |
| G480138 | NA | non-coding | downstream | 229559 | 17328518 ~ 17328718 (+) |
| G480139 | NA | non-coding | downstream | 229792 | 17328751 ~ 17328972 (+) |
| G479239 | NA | other | upstream | 738213 | 16359416 ~ 16359751 (+) |
| G476248 | NA | other | upstream | 3082400 | 13997084 ~ 14015564 (+) |
| G476234 | NA | other | upstream | 3112705 | 13984840 ~ 13985259 (+) |
| G475692 | NA | other | upstream | 3783995 | 13313679 ~ 13313969 (+) |
| dab2ipa | LOC106585786 | other | downstream | 2027 | 17016096 ~ 17126012 (+) |
| G480128 | NA | other | downstream | 221815 | 17320774 ~ 17321165 (+) |
| G480219 | NA | other | downstream | 345794 | 17444753 ~ 17445931 (+) |
| G480062 | LOC106585661 | other | downstream | 618911 | 17717870 ~ 17718201 (+) |
| LOC110525363 | LOC106585667 | other | downstream | 815801 | 17914750 ~ 17980989 (+) |
