G480126


Basic Information

Item Value
gene id G480126
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 17320035 ~ 17320254 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU545621
gttttggtcacttttgaatgctggcggtgctttcactctagtggtagcatgagacggagtctacaacccacacaagtggctcaggtagtgcagctcatccaggatggcacatcaatgtgagatgtggcaagaaggttggctgtgtctgtcagcgtagtgtccagaacatggaggcgctaccaggagacaggccagtacgtcaggagacgtggaggaggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU545621 True 220 lncRNA 0.54 1 17320035 17320254

Neighbor

gene id symbol gene type direction distance location
med27 med27 coding upstream 1181 17225565 ~ 17318854 (+)
LOC118964847 NA coding upstream 188735 17126955 ~ 17131300 (+)
dab2ipa LOC106585786 coding upstream 194023 17016096 ~ 17126012 (+)
phf19 LOC106585785 coding upstream 316802 16983816 ~ 17003233 (+)
traf1 LOC106585784 coding upstream 337784 16970834 ~ 16982251 (+)
LOC110525335 LOC106585645 coding downstream 40498 17360752 ~ 17412856 (+)
LOC110525341 LOC106585648 coding downstream 168334 17488588 ~ 17496137 (+)
LOC110525345 NA coding downstream 206044 17526298 ~ 17534335 (+)
LOC110525350 LOC106585656 coding downstream 316714 17636968 ~ 17643111 (+)
LOC110525352 LOC106585658 coding downstream 336812 17657066 ~ 17715306 (+)
G480058 NA non-coding upstream 837 17319050 ~ 17319198 (+)
G479966 NA non-coding upstream 221076 17097964 ~ 17098959 (+)
G479823 NA non-coding upstream 349643 16969569 ~ 16970392 (+)
G479897 NA non-coding upstream 353057 16966740 ~ 16966978 (+)
G479896 NA non-coding upstream 353333 16966366 ~ 16966702 (+)
G480134 NA non-coding downstream 3451 17323705 ~ 17323942 (+)
G480138 NA non-coding downstream 8264 17328518 ~ 17328718 (+)
G480139 NA non-coding downstream 8497 17328751 ~ 17328972 (+)
G480178 NA non-coding downstream 63450 17383704 ~ 17384057 (+)
G480220 NA non-coding downstream 128315 17448569 ~ 17449504 (+)
G479239 NA other upstream 960284 16359416 ~ 16359751 (+)
G476248 NA other upstream 3304471 13997084 ~ 14015564 (+)
G476234 NA other upstream 3334776 13984840 ~ 13985259 (+)
G480128 NA other downstream 520 17320774 ~ 17321165 (+)
G480219 NA other downstream 124499 17444753 ~ 17445931 (+)
G480062 LOC106585661 other downstream 397616 17717870 ~ 17718201 (+)
LOC110525363 LOC106585667 other downstream 594506 17914750 ~ 17980989 (+)
G481201 NA other downstream 964543 18284797 ~ 18285312 (+)

Expression


Co-expression Network