Gene
RNA
| Item | Value |
|---|---|
| gene id | G480690 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 17327434 ~ 17327749 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU546272 | True | 316 | lncRNA | 0.57 | 1 | 17327434 | 17327749 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ntng2a | LOC106585788 | coding | downstream | 102754 | 17142347 ~ 17224680 (-) |
| LOC110525333 | NA | coding | downstream | 174987 | 17145246 ~ 17152447 (-) |
| LOC110525108 | NA | coding | downstream | 190128 | 17136421 ~ 17137306 (-) |
| endog | endog | coding | downstream | 191762 | 17133840 ~ 17135672 (-) |
| LOC110525323 | stkld1 | coding | downstream | 588337 | 16730789 ~ 16739097 (-) |
| LOC110525337 | NA | coding | upstream | 89480 | 17417229 ~ 17424019 (-) |
| ccdc180 | ccdc180 | coding | upstream | 105332 | 17433081 ~ 17443676 (-) |
| card9 | LOC106585631 | coding | upstream | 118422 | 17446171 ~ 17451908 (-) |
| LOC110525339 | LOC106585647 | coding | upstream | 125121 | 17452870 ~ 17479128 (-) |
| LOC110525342 | LOC106585650 | coding | upstream | 151547 | 17479296 ~ 17497821 (-) |
| G480689 | NA | non-coding | downstream | 278 | 17326823 ~ 17327156 (-) |
| G480688 | NA | non-coding | downstream | 701 | 17326471 ~ 17326733 (-) |
| G480687 | NA | non-coding | downstream | 1123 | 17326029 ~ 17326311 (-) |
| G480685 | NA | non-coding | downstream | 3562 | 17323585 ~ 17323872 (-) |
| G480626 | NA | non-coding | downstream | 25881 | 17263252 ~ 17301553 (-) |
| G480691 | NA | non-coding | upstream | 395 | 17328144 ~ 17328346 (-) |
| G480694 | NA | non-coding | upstream | 3705 | 17331454 ~ 17331695 (-) |
| G480715 | NA | non-coding | upstream | 117167 | 17444916 ~ 17445893 (-) |
| G480716 | NA | non-coding | upstream | 164820 | 17492569 ~ 17493464 (-) |
| G479533 | NA | other | downstream | 733663 | 16589272 ~ 16593771 (-) |
| LOC110525318 | rxra | other | downstream | 753453 | 16538121 ~ 16574149 (-) |
| G478734 | NA | other | downstream | 1443924 | 15881636 ~ 15883510 (-) |
| G478730 | LOC106585767 | other | downstream | 1455636 | 15869799 ~ 15871798 (-) |
| G478643 | NA | other | downstream | 1597851 | 15727490 ~ 15730279 (-) |
| git2a | LOC106585671 | other | upstream | 729462 | 18056651 ~ 18084926 (-) |
| LOC110525370 | LOC106585675 | other | upstream | 796348 | 18121017 ~ 18139654 (-) |
| G482323 | NA | other | upstream | 1629737 | 18957486 ~ 18963891 (-) |
| G482483 | NA | other | upstream | 1863383 | 19191132 ~ 19191457 (-) |
| G482658 | NA | other | upstream | 1982674 | 19310423 ~ 19310993 (-) |
