Gene
RNA
| Item | Value |
|---|---|
| gene id | G480309 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 17583453 ~ 17583685 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU545830 | True | 233 | lncRNA | 0.30 | 1 | 17583453 | 17583685 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525345 | NA | coding | upstream | 49118 | 17526298 ~ 17534335 (+) |
| LOC110525341 | LOC106585648 | coding | upstream | 87316 | 17488588 ~ 17496137 (+) |
| LOC110525335 | LOC106585645 | coding | upstream | 170597 | 17360752 ~ 17412856 (+) |
| med27 | med27 | coding | upstream | 264599 | 17225565 ~ 17318854 (+) |
| LOC118964847 | NA | coding | upstream | 452153 | 17126955 ~ 17131300 (+) |
| LOC110525350 | LOC106585656 | coding | downstream | 53283 | 17636968 ~ 17643111 (+) |
| LOC110525352 | LOC106585658 | coding | downstream | 73381 | 17657066 ~ 17715306 (+) |
| LOC118964848 | NA | coding | downstream | 135824 | 17719509 ~ 17721149 (+) |
| LOC110525354 | LOC106585663 | coding | downstream | 154859 | 17738544 ~ 17764617 (+) |
| LOC110525357 | LOC106585662 | coding | downstream | 191001 | 17774686 ~ 17789072 (+) |
| G480304 | NA | non-coding | upstream | 3409 | 17579843 ~ 17580044 (+) |
| G480250 | NA | non-coding | upstream | 83651 | 17499361 ~ 17499802 (+) |
| G480218 | NA | non-coding | upstream | 85954 | 17496957 ~ 17497499 (+) |
| G480244 | LOC106585650 | non-coding | upstream | 102619 | 17479515 ~ 17480834 (+) |
| G480311 | NA | non-coding | downstream | 4008 | 17587693 ~ 17587971 (+) |
| G480313 | NA | non-coding | downstream | 5228 | 17588913 ~ 17589136 (+) |
| G480318 | NA | non-coding | downstream | 13628 | 17597313 ~ 17597583 (+) |
| G480319 | NA | non-coding | downstream | 15967 | 17599652 ~ 17599901 (+) |
| G480320 | NA | non-coding | downstream | 17078 | 17600763 ~ 17600962 (+) |
| G480219 | NA | other | upstream | 137522 | 17444753 ~ 17445931 (+) |
| G480128 | NA | other | upstream | 262288 | 17320774 ~ 17321165 (+) |
| dab2ipa | LOC106585786 | other | upstream | 476026 | 17016096 ~ 17126012 (+) |
| traf1 | LOC106585784 | other | upstream | 601233 | 16970834 ~ 16982251 (+) |
| G479239 | NA | other | upstream | 1223702 | 16359416 ~ 16359751 (+) |
| G480062 | LOC106585661 | other | downstream | 134185 | 17717870 ~ 17718201 (+) |
| LOC110525363 | LOC106585667 | other | downstream | 331075 | 17914750 ~ 17980989 (+) |
| G481201 | NA | other | downstream | 701112 | 18284797 ~ 18285312 (+) |
| G481205 | NA | other | downstream | 706548 | 18290233 ~ 18290467 (+) |
| G481159 | NA | other | downstream | 751647 | 18335332 ~ 18340566 (+) |
