G481216


Basic Information

Item Value
gene id G481216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 18302459 ~ 18302686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU546864
ATTTAATAGTGatatgaaacaaaacaaaaataagttTGGATTTGTATTACATATTTGAAATAACTAATGTTATTATTAAACGATCAAGGCCTTTAAACAAGGCAACTGTTTAACCGAGTTGGTGtgtgcagttttatagctaatctacacattttgctatgagGGTGAGATGAAATGTTGCTCTTCTAGAGTTCAAGGATTCTTGAAAAACAGGACAATATTTTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU546864 True 228 lncRNA 0.31 1 18302459 18302686

Neighbor

gene id symbol gene type direction distance location
rmi1 rmi1 coding upstream 31636 18266328 ~ 18270823 (+)
LOC110525371 LOC106585677 coding upstream 76283 18148279 ~ 18226176 (+)
LOC110525372 NA coding upstream 115882 18182471 ~ 18186577 (+)
LOC110525368 LOC106585673 coding upstream 189252 18084249 ~ 18113207 (+)
LOC110525366 tchp coding upstream 250520 18044217 ~ 18051939 (+)
ntrk2a ntrk2 coding downstream 2426 18305112 ~ 18362953 (+)
LOC118964849 NA coding downstream 60622 18363308 ~ 18366319 (+)
naa35 naa35 coding downstream 129829 18432515 ~ 18444766 (+)
LOC110525384 LOC106585689 coding downstream 187391 18490077 ~ 18504711 (+)
LOC110525385 LOC106585634 coding downstream 209639 18512325 ~ 18534351 (+)
G481211 NA non-coding upstream 6917 18295331 ~ 18295542 (+)
G481208 NA non-coding upstream 9855 18292366 ~ 18292604 (+)
G481206 NA non-coding upstream 11223 18290980 ~ 18291236 (+)
G481203 NA non-coding upstream 14008 18288237 ~ 18288451 (+)
G481200 NA non-coding upstream 18729 18283492 ~ 18283730 (+)
G481242 NA non-coding downstream 64693 18367379 ~ 18367584 (+)
G481244 NA non-coding downstream 67194 18369880 ~ 18370080 (+)
G481245 NA non-coding downstream 67601 18370287 ~ 18370522 (+)
G481247 NA non-coding downstream 69876 18372562 ~ 18373148 (+)
G481251 NA non-coding downstream 73247 18375933 ~ 18391949 (+)
G481205 NA other upstream 11992 18290233 ~ 18290467 (+)
G481201 NA other upstream 17147 18284797 ~ 18285312 (+)
LOC110525363 LOC106585667 other upstream 324060 17914750 ~ 17980989 (+)
G480062 LOC106585661 other upstream 584258 17717870 ~ 17718201 (+)
G480219 NA other upstream 856528 17444753 ~ 17445931 (+)
G481159 NA other downstream 32646 18335332 ~ 18340566 (+)
G482000 NA other downstream 554941 18857627 ~ 18858156 (+)
G482551 LOC106585704 other downstream 956463 19259149 ~ 19259608 (+)
LOC110525429 NA other downstream 2231823 20533279 ~ 20537508 (+)
LOC110525431 LOC106585378 other downstream 2298132 20591803 ~ 20603188 (+)

Expression


Co-expression Network