G481159


Basic Information

Item Value
gene id G481159
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 18335332 ~ 18340566 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU546804
gctcaattcggtttaaataatgcaaaaacacggtgttggagaagaaagtaaaagtgcaatatgtgccatgtaagaaagctgaTGTTTAATTtctttgctcagaacatatgaaagctggtgcttCAATATTaacagttcttcaatattcccacttaagaagttttaggttgtagttattataggaattatgaagtgtcgactatttctctctataccatttgtatttcatatacctttgactattggatgttctaataggcactttagtattgtcaGCCTAATCTCAGTAGTTGACAGgcttgctaagagctgctggcaaacacagtaaagtttgaatgaatgcttacgagcctgctgctgcctaccaccgcacAGTCaggctgctctatcaaatatcaaatcatagaattaattataataaacacagaaatacgagccttaggtcattaatatggtcaaatccagaaactatcatttcgaaaactaaacgtttattctttcagtgaaatacggaaccgttccgtattttatcgaatgggtggcaaccctaagtctaaataatgttacattgcacaaccttcaatgttatgtcataattatgtaaaattctggcaaattagttcgcaatgagccaggctgcccaaactgttgcatataccctgactctgcgtgcaatgaacacaagagaagtgacacaatttccctagttaatattgcctgctaacattcatttattttaactaaatatgcatgtttaaaaaaatattgactttaagaaaggcattgatgtttatggttagggacattcgtgcaacgattgtgcttttttcgcgaataggattttgttaaatcatcacctgtttggcgaagtaggctgtgaatcgatgataaattaacaggcaacttgaaattggccctaattaatctgccataccaattaatcggtcgacctcttagTGAATATCAACAGTGACAATATTGTGATCAGAAAAACCTACAGgagctcagatacatacaacatgtataacCTTGCTGCACTGACACAACCTTCATTAACTTTTAGCCATGTGTACTGCCTAACTTTTGCATTTCttactctccacacatcagaaagcTCAAACTCAGTTAATAGACCAGACAGGCAAATTTGTGACCGCCGGTAAGGTTCTGCAGCAGTGCGATCAACAGTAAAATccactgtacagttccagtcccccctaaaaccatacacccctcttgGTCACACTGTCTTAGGGTttcctttatttgatcaaatatgtAAATACTCTGCTCTGTACCCTCATTAGGagcataaaaaaaacaacaacaaaaaacacaacatCCGCCTTAACCAATAAAACCCAACCCTTGACAATCTCTGTTGTAGATCCCACAGTCACCCCTAAGCCTGAGGAAAGCAAAATTGCCACCCCAGCACTGGAATTAGTACCATGACTGAGTATATGCTGCCCGTCCCAACACATACCCCCGTCAACCTCATTAACCTCATCACTATGTATCGCCTGTAGAAAAAACGACATTAAGccttttctgttttattacttctaaTACTCAAGCCCATATCCTTCTCCTGATCCTCCTCAACTGAGGCCACAGACCCCAGACTCCCCTCTGCCACATCCCTCTCAACACTCCCCacttgcaccccatcactcataccgggcatctcctccactacctgggagactagtcccacctgaaccccctcctgcACCCCATTACTCGTaatgggcatctcctccactacctgggagactggCCCCACCTGAACCCACTCCTGTACCCCATTACTCGTaatgggcatctcctccactacctgggagactagccccacctgaacccaCTCCTGTACCCCATTACTCGTAATGGGCATCTCCttcactacctgggagactagctccacctgaaccccctcctgtaccccattacTCGTAATGGACATCTCCTTCACTACCTGGCAGACTCCACCTGAACCCCCTGCTGTACCCCATCACTCAAACTGGGTATCTCCTCACCAGTCTTGGGAAATGGCTCCCCAGTTCCATCCTTACCTCCTAAAACAATATTTTTCTGCTGCACATCAGACTTTATGTTCTCCTCTGGTACAAGCTGCAACTCAGTACCCTCAACAACAGGTGCTTGTGGCTGCTCTACCACAGTcggcccacctctccctacatcagtgggcccaggcgttacgaggaccacctgcgTCCCGCCCTCCACCTTCTCCCTTTTCGGGCATGCATGTTGCTTATGGCCaacatccccacactcaaaacactgtTGACTACTCGTACTAGCATAAGCCATATGCAATCTGTTGTCATACTTGACTTCAAACGAAAGTCTGCTCCGGTGagtccaaaaacataaacacctgtCGCCGAAACGACAtgacctgtttcagagccgggtgtttgcaACCCAGCGGGACAATTTTAATTGAACTTTCAAACTTCTCAAACTGCAATGGCTCGCGCTCCAATAGCTCATTGGGAATAAACCGTGTTACGTTCGAAATCGTTACTCTTGTTGACGGAGAAAAAAGTGGCGTAACTTGAATAAACATacctttaagaagtacaccattctcaaccatccgatcaacaagacgctctcctttaagaagtacaccattctcaaccatccgatcaacaagacactcttctttaagaagtacaccattctcaaccatccgatcaacaagacgctcttctttaagaagtacaccattctcaaccatccgatcaacaagacgctctcctttaagaagtacaccattctcaaccatccgatcaacaagacgctcttctttaagaagtacaccattctcaaccatccgatcaacaagacgctcttctttaagaagtacaccattctcaaccatccgatcaacaagacgctcttctttaagaagtacaccattctcaaccatccgatcaacaagacgctcttctttaagaagtacaccattctcaaccatccgatcaacaagacactcttctttaagaggtACACCAttctcaaccatccgatcaacaagacactcttctttaagaggtACACCAttctcaaccatccgatcaacaagacgctcttctttaagaagtacaccattctcaaccatccgatcaacaagacgctcttctttaagaagtacaccattctcaaccatccgatcaacaagacgctcttctttaagaagtacaccattctcaaccatccgatcaacaagacactcttctttaagaagtacaccattctcaaccatccgatcaaccagacactcttctttaagaagtacaccatgctcaaccatccgatcaaccagacactcttctttaagaagtacaccattctcaaccatccgatcaaccagacactcttctttaagaaatacaccatgctcaaccatccgatcaaccagacactcttctttaagaagtacaccattctcaaccatccgatcaacaagacgctcttctttaagaaaaacCTCCACTGCTTTATTCATCCGGGATGCATAAGCAACATTTTGATAGCCTACCTTCTCTCCTACGGcgaccagaaactcctccacaGTGACAGTGGCTTCAGTAACACACCTGAACAGGTGTCAGGGACAGCATCCCCATCTGGGTCACCATCCCCACCAAAACCAAGGCAATTCCAACAAGAAATACAATAAACCTAATTCTACCACTGAAAAAAAATACCTTAATCAGACACCACTCACACTCGCTCatacaattcccagcatgcaccaatgagagcgagagacagagggagacagacagagagagagagagagacagacagagagagagacagagagagagacagacagagagagagacagacagagagagagagagacagagagagagacagagagagacacacagagagagagagacagagagagagagacaaacacaggcagagagagagacagagacagagagagagatacagagagagagacagagagagagacagagagagacagagagagagagacagagagagagacagagacagagagagagaaagagagatacagagagagagacagagagacagagagagaactagCAGGTGTCATGTAAATACAGTTTGATGGTTGAGGAGTACACTGAGCTATAGGtccagtagagagacagagagagacagagagagagacagacagagagagacagagagagacagacagagaactagCAGGTGTCATGTAAATACAGTTTGATGGTTGAGGAGTACACTGAGCTATAGGtccagtagagagacagagagagagacagagagagacagagagagaactagCAGGTGTAATGTAAATACAGTTTGATGGTTGAGGAGAACACTGAGCTATAGGTCCAGTAGGGGCACCTAGCCATGCATACTGTATATTCTATACATATCTCCACATGCTAACACATGAACTAAAACATACCATACCAACAGCCTACATCTCAGCACCCATAATACTTTCATTAGACATAAAAgtgtaaaacacacatacacactcattaaAGCTGCAGTTCAAATGGAAGTTAGGTTTGATGTATGGAGAGCATTTCATTGAGGATGTTACAGGGTCACTGTTGAGACACTTTTATCATACAACTTCCATGAAATACACTTACACACCATTACACTTCCATAGCAAAATAAAAGACAGGTTTTCATAAACCATTAACCTTCTTTTACCAGTACATATAATATATCAACATGTATTGCACATATTTGTACATATTTAAGTGCTATATTTTTGGAAGAGAAATTAGATAGTCATTCTAACACTGTATTAACTAACATTTATTAAACTTGAAGTGCatcttaaaatgtttttttactgGAATATGTGTGTACACTGATATGCagtataaaatgtgtttttatacTTGCTGGAATATCCAGGGCCAAGAGCCTCTTGTAAGTGTGTTATGTGGTTGTTGTGCTGTAAATGATGGCATTGATTGCTGTAGTGTTTTACGTCATATTGAGTTATATTGAGGCTGACTCGTAGACAATAAAACTATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU546804 True 5067 TUCP 0.42 2 18335332 18340566

Neighbor

gene id symbol gene type direction distance location
rmi1 rmi1 coding upstream 64509 18266328 ~ 18270823 (+)
LOC110525371 LOC106585677 coding upstream 109156 18148279 ~ 18226176 (+)
LOC110525372 NA coding upstream 148755 18182471 ~ 18186577 (+)
LOC110525368 LOC106585673 coding upstream 222125 18084249 ~ 18113207 (+)
LOC110525366 tchp coding upstream 283393 18044217 ~ 18051939 (+)
LOC118964849 NA coding downstream 22742 18363308 ~ 18366319 (+)
naa35 naa35 coding downstream 91949 18432515 ~ 18444766 (+)
LOC110525384 LOC106585689 coding downstream 149511 18490077 ~ 18504711 (+)
LOC110525385 LOC106585634 coding downstream 171759 18512325 ~ 18534351 (+)
rfk rfk coding downstream 352421 18692987 ~ 18706601 (+)
G481216 NA non-coding upstream 32646 18302459 ~ 18302686 (+)
G481211 NA non-coding upstream 39790 18295331 ~ 18295542 (+)
G481208 NA non-coding upstream 42728 18292366 ~ 18292604 (+)
G481206 NA non-coding upstream 44096 18290980 ~ 18291236 (+)
G481203 NA non-coding upstream 46881 18288237 ~ 18288451 (+)
G481242 NA non-coding downstream 26813 18367379 ~ 18367584 (+)
G481244 NA non-coding downstream 29314 18369880 ~ 18370080 (+)
G481245 NA non-coding downstream 29721 18370287 ~ 18370522 (+)
G481247 NA non-coding downstream 31996 18372562 ~ 18373148 (+)
G481251 NA non-coding downstream 35367 18375933 ~ 18391949 (+)
G481205 NA other upstream 44865 18290233 ~ 18290467 (+)
G481201 NA other upstream 50020 18284797 ~ 18285312 (+)
LOC110525363 LOC106585667 other upstream 356933 17914750 ~ 17980989 (+)
G480062 LOC106585661 other upstream 617131 17717870 ~ 17718201 (+)
G480219 NA other upstream 889401 17444753 ~ 17445931 (+)
G482000 NA other downstream 517061 18857627 ~ 18858156 (+)
G482551 LOC106585704 other downstream 918583 19259149 ~ 19259608 (+)
LOC110525429 NA other downstream 2193943 20533279 ~ 20537508 (+)
LOC110525431 LOC106585378 other downstream 2260252 20591803 ~ 20603188 (+)
G483669 LOC106585393 other downstream 2462210 20802776 ~ 20803806 (+)

Expression


Co-expression Network