G481879



Basic Information


Item Value
gene id G481879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 18724263 ~ 18725818 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU547625
ACTGTAATTGTTCAAAAAGGTATAAACCCACATTGAGAATTAAATTTGACACATTCTTTATTGGAATACAGTGTCGTATTCACCTCAGTACTCATTCTATAATGGGTTTCATGAACAGGGTATTCAACCATTACAAAGTTGACTCCCATGGCCTGCgtgttacagagagacagactgtggtCCAATTTTGCAGCACCAACCATTGTCTTGGATTCTCAGTCTCTCTGATGTGCTTACAACCTGGGTCGTGTTCACCAGGGCAAGCAACAGAAAAATGTTTTAATACATTAATAAGTAACAGTCTTTTCTTCCATTGAGGAGCCAAATGAACAAATCTTAATGAAATGCACGCCCTTTGCTATAGTGTCATGGACATGTCTTGAATGTGTGGCAGCTAGCAAGGATAGAATAACATTTAAATGAAGTTCACCAAAAAACGTCAACCATATCAAAATTGTTTGATGATCAAGAAGATACAGAACCACCTCAGCTCGAATGCAATGACATAACCGTGCAATGTTGTGGAATAAAGCCCTGCTAGTGCTGTTTGTCAGTGCGATGGCCCCATGGTCTCGGGTAGCAGTAAGAGGAGTcttgttcattagggcacgcaaACGAAAACTTAAAAGCATTTTGTAATGAAAATAAGTGTTTCTTATTGGGCGAGACTAGGTCGTCTTCCCTGTCTGTCAGTTTTCTTGTGTTTTGTGCCTAAAAGATACGACCCTGATTTATCTAATGTGGTCTTTGATAAACAGATCTGATCTTAGTGCCTGTGGAATGATGAGTGAGTCAAGGGCACCTGTAATActttttctctcacacacaaccTGAAAAATAGATGACAGTTTAGCAGTCAGGATTCCCTGTGGCACACAATGGATTCCCTGCGGCATTTAGAATGGGGACATGATTTTCCCACCTATCAATTCAAGTGTTTGCACaatcctgctgtgtgtgtgtgtgtgtgtgtTTCTGTCCTCACACCTCTGACGCAGTCCCTTAAGAGGCCCAGATTTTCTTATAAATTATGTGACTGAGTGAGTGGGCTTGGGTAGAGGGGTGCCCCCCCCCGGCTCCCTGCGGGACCTCCCGTCACCCTTTTAGCGAGCATGTTCTGCAGCACAGTTGCTGCAGAACTTTTCTCTGGCACAGATTGTTCTTTTTTACAAGCACACAGAAACTGCCTTCCGCC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU547625 True 1195 lncRNA 0.43 2 18724263 18725818
Loading

Neighbor


gene id symbol gene type direction distance location
rfk rfk coding upstream 17662 18692987 ~ 18706601 (+)
LOC110525385 LOC106585634 coding upstream 192215 18512325 ~ 18534351 (+)
LOC110525384 LOC106585689 coding upstream 219552 18490077 ~ 18504711 (+)
naa35 naa35 coding upstream 279497 18432515 ~ 18444766 (+)
LOC118964849 NA coding upstream 357944 18363308 ~ 18366319 (+)
LOC110525393 LOC106585695 coding downstream 99783 18825601 ~ 18834885 (+)
LOC110525394 LOC106585697 coding downstream 138699 18864517 ~ 18883144 (+)
LOC110525396 LOC106585698 coding downstream 170098 18895916 ~ 18919592 (+)
LOC110525398 ostf1 coding downstream 199331 18925149 ~ 18942573 (+)
LOC110525399 LOC106585699 coding downstream 231576 18957394 ~ 18963887 (+)
G481261 NA non-coding upstream 327866 18393939 ~ 18396397 (+)
G481251 NA non-coding upstream 332314 18375933 ~ 18391949 (+)
G481247 NA non-coding upstream 351115 18372562 ~ 18373148 (+)
G481245 NA non-coding upstream 353741 18370287 ~ 18370522 (+)
G481929 NA non-coding downstream 12494 18738312 ~ 18739090 (+)
G481999 NA non-coding downstream 131261 18857079 ~ 18857493 (+)
G482005 NA non-coding downstream 138276 18864094 ~ 18864391 (+)
G482064 NA non-coding downstream 226829 18952647 ~ 18952969 (+)
G482024 NA non-coding downstream 238784 18964602 ~ 18964933 (+)
G481159 NA other upstream 383697 18335332 ~ 18340566 (+)
G481205 NA other upstream 433796 18290233 ~ 18290467 (+)
G481201 NA other upstream 438951 18284797 ~ 18285312 (+)
LOC110525363 LOC106585667 other upstream 745864 17914750 ~ 17980989 (+)
G480062 LOC106585661 other upstream 1006062 17717870 ~ 17718201 (+)
G482000 NA other downstream 131809 18857627 ~ 18858156 (+)
G482551 LOC106585704 other downstream 533331 19259149 ~ 19259608 (+)
LOC110525429 NA other downstream 1808691 20533279 ~ 20537508 (+)
LOC110525431 LOC106585378 other downstream 1875000 20591803 ~ 20603188 (+)
G483669 LOC106585393 other downstream 2076958 20802776 ~ 20803806 (+)

Expression


G481879 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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G481879 Expression in each Bioproject

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G481879 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
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Co-expression Network