G482532


Basic Information

Item Value
gene id G482532
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 19235871 ~ 19236129 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU548350
CTCTCCTCCGCTCTCTGTGTGCAGTGCATCATGGTTGTGAAAGTGAGCGTTGTGATGAGGCCTCCCAGGAAGTGCTGAATGCTCAAACTCAACACGGCCATACCTGAGGGGCAAACACAGTAACAGCCTTGACACTGTCTCAACACAATATTGAAAAACATTATGGGTGCTTACATTTGTCCAATTTCACACGTGTGAATTGGGAATGTGATTTTTGCACATCCCACTCTCCCTGAGACCCTTGGAGAGTGGGGTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU548350 True 259 lncRNA 0.48 1 19235871 19236129

Neighbor

gene id symbol gene type direction distance location
LOC110525400 LOC106585702 coding upstream 212951 18975768 ~ 19022920 (+)
LOC118964850 NA coding upstream 261578 18972352 ~ 18974293 (+)
LOC110525399 LOC106585699 coding upstream 271984 18957394 ~ 18963887 (+)
LOC110525398 ostf1 coding upstream 293298 18925149 ~ 18942573 (+)
LOC110525396 LOC106585698 coding upstream 316279 18895916 ~ 18919592 (+)
LOC110525403 LOC106585349 coding downstream 59109 19295238 ~ 19304130 (+)
LOC110525111 NA coding downstream 111679 19347808 ~ 19349023 (+)
LOC110525406 LOC106585353 coding downstream 223902 19460031 ~ 19469464 (+)
LOC110525411 f108b coding downstream 267512 19503641 ~ 19539094 (+)
LOC110525412 LOC106585357 coding downstream 299797 19535926 ~ 19573442 (+)
G482530 NA non-coding upstream 3987 19231565 ~ 19231884 (+)
G482529 NA non-coding upstream 4513 19229554 ~ 19231358 (+)
G482525 NA non-coding upstream 7456 19228156 ~ 19228415 (+)
G482524 NA non-coding upstream 8033 19227611 ~ 19227838 (+)
G482516 NA non-coding upstream 14285 19221359 ~ 19221586 (+)
G482533 NA non-coding downstream 915 19237044 ~ 19237511 (+)
G482540 NA non-coding downstream 10891 19247020 ~ 19247236 (+)
G482541 NA non-coding downstream 13143 19249272 ~ 19249472 (+)
G482547 NA non-coding downstream 19855 19255984 ~ 19256188 (+)
G482548 NA non-coding downstream 20456 19256585 ~ 19256841 (+)
G482000 NA other upstream 377715 18857627 ~ 18858156 (+)
G481159 NA other upstream 895305 18335332 ~ 18340566 (+)
G481205 NA other upstream 945404 18290233 ~ 18290467 (+)
G481201 NA other upstream 950559 18284797 ~ 18285312 (+)
LOC110525363 LOC106585667 other upstream 1257472 17914750 ~ 17980989 (+)
G482551 LOC106585704 other downstream 23020 19259149 ~ 19259608 (+)
LOC110525429 NA other downstream 1298380 20533279 ~ 20537508 (+)
LOC110525431 LOC106585378 other downstream 1364689 20591803 ~ 20603188 (+)
G483669 LOC106585393 other downstream 1566647 20802776 ~ 20803806 (+)
LOC110525116 adamtsl2 other downstream 1722626 20958755 ~ 20984618 (+)

Expression


Co-expression Network