Gene
RNA
| Item | Value |
|---|---|
| gene id | G482540 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 19247020 ~ 19247236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU548358 | True | 217 | lncRNA | 0.41 | 1 | 19247020 | 19247236 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525400 | LOC106585702 | coding | upstream | 224100 | 18975768 ~ 19022920 (+) |
| LOC118964850 | NA | coding | upstream | 272727 | 18972352 ~ 18974293 (+) |
| LOC110525399 | LOC106585699 | coding | upstream | 283133 | 18957394 ~ 18963887 (+) |
| LOC110525398 | ostf1 | coding | upstream | 304447 | 18925149 ~ 18942573 (+) |
| LOC110525396 | LOC106585698 | coding | upstream | 327428 | 18895916 ~ 18919592 (+) |
| LOC110525403 | LOC106585349 | coding | downstream | 48002 | 19295238 ~ 19304130 (+) |
| LOC110525111 | NA | coding | downstream | 100572 | 19347808 ~ 19349023 (+) |
| LOC110525406 | LOC106585353 | coding | downstream | 212795 | 19460031 ~ 19469464 (+) |
| LOC110525411 | f108b | coding | downstream | 256405 | 19503641 ~ 19539094 (+) |
| LOC110525412 | LOC106585357 | coding | downstream | 288690 | 19535926 ~ 19573442 (+) |
| G482533 | NA | non-coding | upstream | 9509 | 19237044 ~ 19237511 (+) |
| G482532 | NA | non-coding | upstream | 10891 | 19235871 ~ 19236129 (+) |
| G482530 | NA | non-coding | upstream | 15136 | 19231565 ~ 19231884 (+) |
| G482529 | NA | non-coding | upstream | 15662 | 19229554 ~ 19231358 (+) |
| G482525 | NA | non-coding | upstream | 18605 | 19228156 ~ 19228415 (+) |
| G482541 | NA | non-coding | downstream | 2036 | 19249272 ~ 19249472 (+) |
| G482547 | NA | non-coding | downstream | 8748 | 19255984 ~ 19256188 (+) |
| G482548 | NA | non-coding | downstream | 9349 | 19256585 ~ 19256841 (+) |
| G482549 | NA | non-coding | downstream | 9843 | 19257079 ~ 19257303 (+) |
| G482590 | NA | non-coding | downstream | 28133 | 19275369 ~ 19275654 (+) |
| G482000 | NA | other | upstream | 388864 | 18857627 ~ 18858156 (+) |
| G481159 | NA | other | upstream | 906454 | 18335332 ~ 18340566 (+) |
| G481205 | NA | other | upstream | 956553 | 18290233 ~ 18290467 (+) |
| G481201 | NA | other | upstream | 961708 | 18284797 ~ 18285312 (+) |
| LOC110525363 | LOC106585667 | other | upstream | 1268621 | 17914750 ~ 17980989 (+) |
| G482551 | LOC106585704 | other | downstream | 11913 | 19259149 ~ 19259608 (+) |
| LOC110525429 | NA | other | downstream | 1287273 | 20533279 ~ 20537508 (+) |
| LOC110525431 | LOC106585378 | other | downstream | 1353582 | 20591803 ~ 20603188 (+) |
| G483669 | LOC106585393 | other | downstream | 1555540 | 20802776 ~ 20803806 (+) |
| LOC110525116 | adamtsl2 | other | downstream | 1711519 | 20958755 ~ 20984618 (+) |
