G482548


Basic Information

Item Value
gene id G482548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 19256585 ~ 19256841 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU548366
ctcacacacacatacatacacacgatGCTTAAAACCAAACTGTGTTCATATcaactctcgctcacacacacatacatacacacgctgATTAACACCAAACTGTGTTCATATcaactctcgctcacacacacatacatacacacgctgATTAACACCAAACTGTGTTCATATcaactctcgctcacacacacatacatacacacgctgATTAACACCAAACTGTGTTCATATcaactctcgctcacacacacatacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU548366 True 257 lncRNA 0.41 1 19256585 19256841

Neighbor

gene id symbol gene type direction distance location
LOC110525400 LOC106585702 coding upstream 233665 18975768 ~ 19022920 (+)
LOC118964850 NA coding upstream 282292 18972352 ~ 18974293 (+)
LOC110525399 LOC106585699 coding upstream 292698 18957394 ~ 18963887 (+)
LOC110525398 ostf1 coding upstream 314012 18925149 ~ 18942573 (+)
LOC110525396 LOC106585698 coding upstream 336993 18895916 ~ 18919592 (+)
LOC110525403 LOC106585349 coding downstream 38397 19295238 ~ 19304130 (+)
LOC110525111 NA coding downstream 90967 19347808 ~ 19349023 (+)
LOC110525406 LOC106585353 coding downstream 203190 19460031 ~ 19469464 (+)
LOC110525411 f108b coding downstream 246800 19503641 ~ 19539094 (+)
LOC110525412 LOC106585357 coding downstream 279085 19535926 ~ 19573442 (+)
G482547 NA non-coding upstream 397 19255984 ~ 19256188 (+)
G482541 NA non-coding upstream 7113 19249272 ~ 19249472 (+)
G482540 NA non-coding upstream 9349 19247020 ~ 19247236 (+)
G482533 NA non-coding upstream 19074 19237044 ~ 19237511 (+)
G482532 NA non-coding upstream 20456 19235871 ~ 19236129 (+)
G482549 NA non-coding downstream 238 19257079 ~ 19257303 (+)
G482590 NA non-coding downstream 18528 19275369 ~ 19275654 (+)
G482599 NA non-coding downstream 24087 19280928 ~ 19281482 (+)
G482603 NA non-coding downstream 29496 19286337 ~ 19286980 (+)
G482615 NA non-coding downstream 58094 19314935 ~ 19322851 (+)
G482000 NA other upstream 398429 18857627 ~ 18858156 (+)
G481159 NA other upstream 916019 18335332 ~ 18340566 (+)
G481205 NA other upstream 966118 18290233 ~ 18290467 (+)
G481201 NA other upstream 971273 18284797 ~ 18285312 (+)
LOC110525363 LOC106585667 other upstream 1278186 17914750 ~ 17980989 (+)
G482551 LOC106585704 other downstream 2308 19259149 ~ 19259608 (+)
LOC110525429 NA other downstream 1277668 20533279 ~ 20537508 (+)
LOC110525431 LOC106585378 other downstream 1343977 20591803 ~ 20603188 (+)
G483669 LOC106585393 other downstream 1545935 20802776 ~ 20803806 (+)
LOC110525116 adamtsl2 other downstream 1701914 20958755 ~ 20984618 (+)

Expression


Co-expression Network