G483435


Basic Information

Item Value
gene id G483435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 20327552 ~ 20327756 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU549380
ATGGAGTGCTGAaagtatatatttgttttatcttGCTGTGTTAGCTCTTTTCCacattatgtctatctctgataagttacccaggaaagggctgaaaatagcccatattaacacATGTAGCCTTACACATAAGCTTCATGCGGTCAATAACTAGCTAACATTTATATATTAGCCacttctgagactcacttagataattcatttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU549380 True 205 lncRNA 0.35 1 20327552 20327756

Neighbor

gene id symbol gene type direction distance location
LOC110525418 LOC106585365 coding upstream 263405 20039566 ~ 20064147 (+)
LOC110525417 LOC106585364 coding upstream 315820 19945869 ~ 20011732 (+)
LOC110525113 LOC101448038 coding upstream 383504 19919653 ~ 19944048 (+)
klf9 LOC106585360 coding upstream 483818 19836385 ~ 19854201 (+)
LOC110525413 LOC106585358 coding upstream 498808 19672383 ~ 19828744 (+)
rchy1 LOC106585368 coding downstream 113105 20440861 ~ 20445824 (+)
LOC101268919 LOC106585370 coding downstream 136563 20464319 ~ 20477399 (+)
yee9 yee9 coding downstream 150077 20477833 ~ 20479230 (+)
si:ch211-12e13.1 LOC106585371 coding downstream 151581 20479337 ~ 20485695 (+)
susd1 LOC106585372 coding downstream 160169 20487925 ~ 20499166 (+)
G483364 NA non-coding upstream 109689 20217661 ~ 20217863 (+)
G483363 NA non-coding upstream 114024 20207875 ~ 20213528 (+)
G483357 NA non-coding upstream 128959 20198194 ~ 20198593 (+)
G483356 NA non-coding upstream 129941 20197298 ~ 20197611 (+)
G483353 NA non-coding upstream 137000 20190320 ~ 20190552 (+)
G483437 NA non-coding downstream 1801 20329557 ~ 20329872 (+)
G483445 NA non-coding downstream 13425 20341181 ~ 20341417 (+)
G483521 NA non-coding downstream 124034 20451790 ~ 20452298 (+)
G483526 LOC106585369 non-coding downstream 132958 20460714 ~ 20461457 (+)
G482551 LOC106585704 other upstream 1067944 19259149 ~ 19259608 (+)
G482000 NA other upstream 1469396 18857627 ~ 18858156 (+)
G481159 NA other upstream 1986986 18335332 ~ 18340566 (+)
G481205 NA other upstream 2037085 18290233 ~ 18290467 (+)
G481201 NA other upstream 2042240 18284797 ~ 18285312 (+)
LOC110525429 NA other downstream 206753 20533279 ~ 20537508 (+)
LOC110525431 LOC106585378 other downstream 273062 20591803 ~ 20603188 (+)
G483669 LOC106585393 other downstream 475020 20802776 ~ 20803806 (+)
LOC110525116 adamtsl2 other downstream 630999 20958755 ~ 20984618 (+)
G484674 NA other downstream 1136383 21464139 ~ 21466905 (+)

Expression


Co-expression Network