G484603


Basic Information

Item Value
gene id G484603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 21311250 ~ 21311520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU550768
atgtatatactgtccttgataccatctactgcatcttgcctatgccgttctgtaccatcactcattgaaatatctttatgtacatattctttatccctttacacttgtgtgtacaaggtagtagttgtggaattgttaggttagattactcgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataagatttgatttggaAGTAATTTGCGAGCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU550768 True 271 lncRNA 0.37 1 21311250 21311520

Neighbor

gene id symbol gene type direction distance location
ptgs1 LOC106585418 coding upstream 39105 21211574 ~ 21272145 (+)
LOC110525457 LOC106585409 coding upstream 212682 21062438 ~ 21098568 (+)
cfap157 cfap157 coding upstream 254703 21043032 ~ 21056547 (+)
LOC110525453 LOC106580025 coding upstream 291638 21014389 ~ 21019612 (+)
LOC110525452 LOC106585404 coding upstream 296988 21010776 ~ 21014262 (+)
pmpca LOC106585420 coding downstream 6528 21318048 ~ 21330806 (+)
LOC110525469 LOC106585423 coding downstream 80351 21391871 ~ 21444594 (+)
dpp7 dpp7 coding downstream 133708 21445228 ~ 21453374 (+)
LOC110525013 LOC106585433 coding downstream 429524 21741044 ~ 21744737 (+)
fgf17 LOC106585328 coding downstream 500847 21812367 ~ 21818773 (+)
G484506 NA non-coding upstream 96711 21162278 ~ 21214539 (+)
G484501 NA non-coding upstream 160506 21143513 ~ 21150744 (+)
G484500 NA non-coding upstream 168629 21142227 ~ 21142621 (+)
G484499 NA non-coding upstream 170079 21140812 ~ 21141171 (+)
G484479 LOC106585411 non-coding upstream 191775 21117552 ~ 21119475 (+)
G484604 NA non-coding downstream 908 21312428 ~ 21312647 (+)
G484615 NA non-coding downstream 20094 21331614 ~ 21332027 (+)
G484616 NA non-coding downstream 20617 21332137 ~ 21332708 (+)
G484570 NA non-coding downstream 40066 21351586 ~ 21351797 (+)
G484619 NA non-coding downstream 46256 21357776 ~ 21358517 (+)
LOC110525116 adamtsl2 other upstream 347924 20958755 ~ 20984618 (+)
G483669 LOC106585393 other upstream 507444 20802776 ~ 20803806 (+)
LOC110525431 LOC106585378 other upstream 708248 20591803 ~ 20603188 (+)
LOC110525429 NA other upstream 774152 20533279 ~ 20537508 (+)
G482551 LOC106585704 other upstream 2051642 19259149 ~ 19259608 (+)
G484674 NA other downstream 152619 21464139 ~ 21466905 (+)
G484726 NA other downstream 242212 21553732 ~ 21554097 (+)
G485780 NA other downstream 1129796 22441316 ~ 22444619 (+)
G486127 NA other downstream 1362722 22674242 ~ 22674452 (+)
LOC110525518 LOC106585474 other downstream 1879112 23079630 ~ 23197514 (+)

Expression


Co-expression Network