G485121


Basic Information

Item Value
gene id G485121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 21811717 ~ 21811925 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU551357
CTCATGTATTGCACTGAAACAATAAATTGTGAAAATATCAAAGTCTCTCAGAGACATCACCATAACCTCGATGACGACTTTGACACTGGTGAAGGCCTAGACAAAAATAAACCTTAATTCAATGAATGCCAGTTTAACCAGCGAAAAATAAGAATCCTGTTAACATCAGTTGGTCATCAATTAGTGACGTTGATTAGGCTACTACACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU551357 True 209 lncRNA 0.36 1 21811717 21811925

Neighbor

gene id symbol gene type direction distance location
LOC110525013 LOC106585433 coding upstream 66980 21741044 ~ 21744737 (+)
dpp7 dpp7 coding upstream 358343 21445228 ~ 21453374 (+)
LOC110525469 LOC106585423 coding upstream 367123 21391871 ~ 21444594 (+)
pmpca LOC106585420 coding upstream 480911 21318048 ~ 21330806 (+)
ptgs1 LOC106585418 coding upstream 539572 21211574 ~ 21272145 (+)
fgf17 LOC106585328 coding downstream 442 21812367 ~ 21818773 (+)
fkbp15b LOC106585435 coding downstream 21652 21833192 ~ 21847552 (+)
LOC110525481 LOC106585436 coding downstream 35925 21847850 ~ 21852139 (+)
ccn1l2 LOC106585437 coding downstream 42239 21854164 ~ 21863431 (+)
si:dkey-90l8.3 LOC106585438 coding downstream 53954 21865879 ~ 21870071 (+)
G485043 NA non-coding upstream 101912 21709596 ~ 21709805 (+)
G484641 NA non-coding upstream 424276 21387157 ~ 21387441 (+)
G484639 NA non-coding upstream 426122 21385247 ~ 21385595 (+)
G484619 NA non-coding upstream 453200 21357776 ~ 21358517 (+)
G484570 NA non-coding upstream 459920 21351586 ~ 21351797 (+)
G485129 NA non-coding downstream 14107 21826032 ~ 21826326 (+)
G485093 NA non-coding downstream 15701 21827626 ~ 21828343 (+)
G485092 NA non-coding downstream 16815 21828740 ~ 21831681 (+)
G485094 NA non-coding downstream 20237 21832162 ~ 21832821 (+)
G484726 NA other upstream 257620 21553732 ~ 21554097 (+)
G484674 NA other upstream 344812 21464139 ~ 21466905 (+)
LOC110525116 adamtsl2 other upstream 848391 20958755 ~ 20984618 (+)
G483669 LOC106585393 other upstream 1007911 20802776 ~ 20803806 (+)
LOC110525431 LOC106585378 other upstream 1208715 20591803 ~ 20603188 (+)
G485780 NA other downstream 629391 22441316 ~ 22444619 (+)
G486127 NA other downstream 862317 22674242 ~ 22674452 (+)
LOC110525518 LOC106585474 other downstream 1378707 23079630 ~ 23197514 (+)
G487078 LOC106585486 other downstream 1716815 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 1841195 23653120 ~ 23667927 (+)

Expression


Co-expression Network