Gene
RNA
| Item | Value |
|---|---|
| gene id | G485415 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 21993523 ~ 21993846 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU551696 | True | 324 | lncRNA | 0.34 | 1 | 21993523 | 21993846 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525486 | LOC106585440 | coding | upstream | 43323 | 21929133 ~ 21950200 (+) |
| bcl2l16 | LOC106585329 | coding | upstream | 102526 | 21888990 ~ 21890997 (+) |
| si:dkey-90l8.3 | LOC106585438 | coding | upstream | 123452 | 21865879 ~ 21870071 (+) |
| ccn1l2 | LOC106585437 | coding | upstream | 130092 | 21854164 ~ 21863431 (+) |
| LOC110525481 | LOC106585436 | coding | upstream | 141384 | 21847850 ~ 21852139 (+) |
| LOC110525487 | LOC106585441 | coding | downstream | 103647 | 22097493 ~ 22105104 (+) |
| adgrd2 | LOC106585442 | coding | downstream | 201577 | 22195423 ~ 22214704 (+) |
| LOC110525489 | olm2a | coding | downstream | 386430 | 22380276 ~ 22395072 (+) |
| LOC110525496 | LOC106585447 | coding | downstream | 472639 | 22466485 ~ 22507759 (+) |
| LOC110525121 | NA | coding | downstream | 514201 | 22508047 ~ 22511597 (+) |
| G485393 | NA | non-coding | upstream | 28082 | 21965230 ~ 21965441 (+) |
| G485162 | NA | non-coding | upstream | 81405 | 21911896 ~ 21912118 (+) |
| G485161 | NA | non-coding | upstream | 82351 | 21910715 ~ 21911172 (+) |
| G485151 | NA | non-coding | upstream | 108941 | 21884276 ~ 21884582 (+) |
| G485429 | NA | non-coding | downstream | 21333 | 22015179 ~ 22015408 (+) |
| G485440 | NA | non-coding | downstream | 28562 | 22022408 ~ 22022631 (+) |
| G485451 | NA | non-coding | downstream | 41964 | 22035810 ~ 22036107 (+) |
| G485488 | NA | non-coding | downstream | 77931 | 22071777 ~ 22072034 (+) |
| G485490 | NA | non-coding | downstream | 80710 | 22074556 ~ 22074823 (+) |
| G484726 | NA | other | upstream | 439426 | 21553732 ~ 21554097 (+) |
| G484674 | NA | other | upstream | 526618 | 21464139 ~ 21466905 (+) |
| LOC110525116 | adamtsl2 | other | upstream | 1030197 | 20958755 ~ 20984618 (+) |
| G483669 | LOC106585393 | other | upstream | 1189717 | 20802776 ~ 20803806 (+) |
| LOC110525431 | LOC106585378 | other | upstream | 1390521 | 20591803 ~ 20603188 (+) |
| G485780 | NA | other | downstream | 447470 | 22441316 ~ 22444619 (+) |
| G486127 | NA | other | downstream | 680396 | 22674242 ~ 22674452 (+) |
| LOC110525518 | LOC106585474 | other | downstream | 1196786 | 23079630 ~ 23197514 (+) |
| G487078 | LOC106585486 | other | downstream | 1534894 | 23528740 ~ 23531799 (+) |
| G487146 | LOC106585492 | other | downstream | 1659274 | 23653120 ~ 23667927 (+) |
