G485451


Basic Information

Item Value
gene id G485451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 22035810 ~ 22036107 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU551735
GTTCTGGAATCTCCATCGTAGTGCTTCGGTGGAGTTAAGCAGGGTTCCCGGGAAACCGGGGGGACAGCACTGCTACCAGctgggttactgaggggctgggaggATACCGTCGCGGTAGGCTGCCTAGTAGGCAACCCACGGAATTGCTCACGCAAAGCGTCCAATGCTATGTCGTGACGTTCGGCCACATCCTGGAACCCTTCCATCAGACCACGAAGCAACTCCTCGTGTCTACCAATGAGGACTCCCTGGGAGGTGATGGCgttgcggagctggtccaagtctgctgggtcagtca

Function

NR:

description
PREDICTED: protein LDOC1L-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU551735 True 298 lncRNA 0.58 1 22035810 22036107

Neighbor

gene id symbol gene type direction distance location
LOC110525486 LOC106585440 coding upstream 85610 21929133 ~ 21950200 (+)
bcl2l16 LOC106585329 coding upstream 144813 21888990 ~ 21890997 (+)
si:dkey-90l8.3 LOC106585438 coding upstream 165739 21865879 ~ 21870071 (+)
ccn1l2 LOC106585437 coding upstream 172379 21854164 ~ 21863431 (+)
LOC110525481 LOC106585436 coding upstream 183671 21847850 ~ 21852139 (+)
LOC110525487 LOC106585441 coding downstream 61386 22097493 ~ 22105104 (+)
adgrd2 LOC106585442 coding downstream 159316 22195423 ~ 22214704 (+)
LOC110525489 olm2a coding downstream 344169 22380276 ~ 22395072 (+)
LOC110525496 LOC106585447 coding downstream 430378 22466485 ~ 22507759 (+)
LOC110525121 NA coding downstream 471940 22508047 ~ 22511597 (+)
G485440 NA non-coding upstream 13179 22022408 ~ 22022631 (+)
G485429 NA non-coding upstream 20402 22015179 ~ 22015408 (+)
G485415 NA non-coding upstream 41964 21993523 ~ 21993846 (+)
G485393 NA non-coding upstream 70369 21965230 ~ 21965441 (+)
G485162 NA non-coding upstream 123692 21911896 ~ 21912118 (+)
G485488 NA non-coding downstream 35670 22071777 ~ 22072034 (+)
G485490 NA non-coding downstream 38449 22074556 ~ 22074823 (+)
G485530 NA non-coding downstream 77904 22114011 ~ 22114223 (+)
G485539 NA non-coding downstream 84075 22120182 ~ 22120434 (+)
G485583 NA non-coding downstream 119246 22155353 ~ 22155736 (+)
G484726 NA other upstream 481713 21553732 ~ 21554097 (+)
G484674 NA other upstream 568905 21464139 ~ 21466905 (+)
LOC110525116 adamtsl2 other upstream 1072484 20958755 ~ 20984618 (+)
G483669 LOC106585393 other upstream 1232004 20802776 ~ 20803806 (+)
LOC110525431 LOC106585378 other upstream 1432808 20591803 ~ 20603188 (+)
G485780 NA other downstream 405209 22441316 ~ 22444619 (+)
G486127 NA other downstream 638135 22674242 ~ 22674452 (+)
LOC110525518 LOC106585474 other downstream 1154525 23079630 ~ 23197514 (+)
G487078 LOC106585486 other downstream 1492633 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 1617013 23653120 ~ 23667927 (+)

Expression


Co-expression Network