G485490


Basic Information

Item Value
gene id G485490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 22074556 ~ 22074823 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU551774
gtaggtgtcctggagggaaggtagtttgctcccggtgatgcattgggtgGACCACAccactggagagccctgcagttgcgggcggtgcagttggcTTAGCAGGCAGGGATGCAGCCCAACAGTGCATCTGTAAAaatttgtgagggtcttaggggccaagacaaatttcttcagcctcctgaggttgaagaggcgttgttgcgtcttcttcaccacactgtttgtGTCGGTGGACCATTTCCGATTGTTAGTGATgtgtacactgagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU551774 True 268 lncRNA 0.53 1 22074556 22074823

Neighbor

gene id symbol gene type direction distance location
LOC110525486 LOC106585440 coding upstream 124356 21929133 ~ 21950200 (+)
bcl2l16 LOC106585329 coding upstream 183559 21888990 ~ 21890997 (+)
si:dkey-90l8.3 LOC106585438 coding upstream 204485 21865879 ~ 21870071 (+)
ccn1l2 LOC106585437 coding upstream 211125 21854164 ~ 21863431 (+)
LOC110525481 LOC106585436 coding upstream 222417 21847850 ~ 21852139 (+)
LOC110525487 LOC106585441 coding downstream 22670 22097493 ~ 22105104 (+)
adgrd2 LOC106585442 coding downstream 120600 22195423 ~ 22214704 (+)
LOC110525489 olm2a coding downstream 305453 22380276 ~ 22395072 (+)
LOC110525496 LOC106585447 coding downstream 391662 22466485 ~ 22507759 (+)
LOC110525121 NA coding downstream 433224 22508047 ~ 22511597 (+)
G485488 NA non-coding upstream 2522 22071777 ~ 22072034 (+)
G485451 NA non-coding upstream 38449 22035810 ~ 22036107 (+)
G485440 NA non-coding upstream 51925 22022408 ~ 22022631 (+)
G485429 NA non-coding upstream 59148 22015179 ~ 22015408 (+)
G485415 NA non-coding upstream 80710 21993523 ~ 21993846 (+)
G485530 NA non-coding downstream 39188 22114011 ~ 22114223 (+)
G485539 NA non-coding downstream 45359 22120182 ~ 22120434 (+)
G485583 NA non-coding downstream 80530 22155353 ~ 22155736 (+)
G485593 NA non-coding downstream 90450 22165273 ~ 22165491 (+)
G485597 NA non-coding downstream 94838 22169661 ~ 22170015 (+)
G484726 NA other upstream 520459 21553732 ~ 21554097 (+)
G484674 NA other upstream 607651 21464139 ~ 21466905 (+)
LOC110525116 adamtsl2 other upstream 1111230 20958755 ~ 20984618 (+)
G483669 LOC106585393 other upstream 1270750 20802776 ~ 20803806 (+)
LOC110525431 LOC106585378 other upstream 1471554 20591803 ~ 20603188 (+)
G485780 NA other downstream 366493 22441316 ~ 22444619 (+)
G486127 NA other downstream 599419 22674242 ~ 22674452 (+)
LOC110525518 LOC106585474 other downstream 1115809 23079630 ~ 23197514 (+)
G487078 LOC106585486 other downstream 1453917 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 1578297 23653120 ~ 23667927 (+)

Expression


Co-expression Network