G485583


Basic Information

Item Value
gene id G485583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 22155353 ~ 22155736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU551877
ctcttaccattatttgcgttgtttgtttctatgttttgtttggtcagggtgtgatatgagtgggcattctattctatgttgcatgtctagttagtctgtttctatgtgttttggcctgatatggttctcaatcagtggcaggtgttcgtcgttgtctctgattgggaaccatatttaggtagcctgttttgtattgtggttcgtgggttattgtctatgtgatgttgcatgtttgcacaCAGTATTGATAGCGGTCACGTTCATcttattattttgtttgtttgtttagtgttcttcgtgtTCATTCGTCTAACATTAAAAGTatgtattcacaccacgctgcgctttggtctcctcaatacgacgaacgtgacacctgtgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU551877 True 384 lncRNA 0.40 1 22155353 22155736

Neighbor

gene id symbol gene type direction distance location
LOC110525487 LOC106585441 coding upstream 50249 22097493 ~ 22105104 (+)
LOC110525486 LOC106585440 coding upstream 205153 21929133 ~ 21950200 (+)
bcl2l16 LOC106585329 coding upstream 264356 21888990 ~ 21890997 (+)
si:dkey-90l8.3 LOC106585438 coding upstream 285282 21865879 ~ 21870071 (+)
ccn1l2 LOC106585437 coding upstream 291922 21854164 ~ 21863431 (+)
adgrd2 LOC106585442 coding downstream 39687 22195423 ~ 22214704 (+)
LOC110525489 olm2a coding downstream 224540 22380276 ~ 22395072 (+)
LOC110525496 LOC106585447 coding downstream 310749 22466485 ~ 22507759 (+)
LOC110525121 NA coding downstream 352311 22508047 ~ 22511597 (+)
LOC110525015 LOC106585332 coding downstream 371031 22526767 ~ 22528403 (+)
G485539 NA non-coding upstream 34919 22120182 ~ 22120434 (+)
G485530 NA non-coding upstream 41130 22114011 ~ 22114223 (+)
G485490 NA non-coding upstream 80530 22074556 ~ 22074823 (+)
G485488 NA non-coding upstream 83319 22071777 ~ 22072034 (+)
G485451 NA non-coding upstream 119246 22035810 ~ 22036107 (+)
G485593 NA non-coding downstream 9537 22165273 ~ 22165491 (+)
G485597 NA non-coding downstream 13925 22169661 ~ 22170015 (+)
G485603 NA non-coding downstream 21839 22177575 ~ 22177988 (+)
G485613 NA non-coding downstream 37094 22192830 ~ 22193069 (+)
G485696 NA non-coding downstream 90406 22246142 ~ 22246373 (+)
G484726 NA other upstream 601256 21553732 ~ 21554097 (+)
G484674 NA other upstream 688448 21464139 ~ 21466905 (+)
LOC110525116 adamtsl2 other upstream 1192027 20958755 ~ 20984618 (+)
G483669 LOC106585393 other upstream 1351547 20802776 ~ 20803806 (+)
LOC110525431 LOC106585378 other upstream 1552351 20591803 ~ 20603188 (+)
G485780 NA other downstream 285580 22441316 ~ 22444619 (+)
G486127 NA other downstream 518506 22674242 ~ 22674452 (+)
LOC110525518 LOC106585474 other downstream 1034896 23079630 ~ 23197514 (+)
G487078 LOC106585486 other downstream 1373004 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 1497384 23653120 ~ 23667927 (+)

Expression


Co-expression Network