G486129


Basic Information

Item Value
gene id G486129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 22678812 ~ 22679031 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU552482
gtaaggtagaggggtggtccttaactagcctctcaaagcacttcatgatgacagaagtgagtgctacggggcgatagtcatttagttcagttacctttgctttcttgggtagaggaacaatggtggacatcttgaagcaagtgcagacagcagactgggatagggagagattgaatgtctgtaaacactccagctgGTCTGGGCATGATCTGAGGACGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU552482 True 220 lncRNA 0.49 1 22678812 22679031

Neighbor

gene id symbol gene type direction distance location
LOC110525503 LOC106585452 coding upstream 22429 22646328 ~ 22656383 (+)
LOC110525504 LOC106585454 coding upstream 33919 22640897 ~ 22644893 (+)
LOC110525502 zdh12 coding upstream 50788 22626044 ~ 22628024 (+)
LOC110525499 LOC106585451 coding upstream 52895 22617119 ~ 22625917 (+)
LOC110525015 LOC106585332 coding upstream 150409 22526767 ~ 22528403 (+)
LOC110525507 LOC106585456 coding downstream 13769 22692800 ~ 22721327 (+)
LOC110525510 LOC106585458 coding downstream 42603 22721634 ~ 22727163 (+)
gstt1a LOC106585460 coding downstream 75238 22754269 ~ 22757520 (+)
LOC110525512 LOC106585461 coding downstream 80410 22759441 ~ 22766009 (+)
LOC110525516 LOC106585462 coding downstream 97895 22776022 ~ 22781759 (+)
G486125 NA non-coding upstream 6725 22671751 ~ 22672087 (+)
G486069 NA non-coding upstream 88851 22589758 ~ 22589961 (+)
G485862 NA non-coding upstream 157950 22520587 ~ 22520862 (+)
G485806 rpl35 non-coding upstream 237772 22438886 ~ 22441040 (+)
G486111 NA non-coding downstream 51959 22730990 ~ 22732203 (+)
G486115 LOC106585459 non-coding downstream 53333 22732364 ~ 22732608 (+)
G486141 LOC103361053 non-coding downstream 53669 22732700 ~ 22733291 (+)
G486142 LOC106585459 non-coding downstream 54442 22733473 ~ 22734215 (+)
G486143 LOC106585459 non-coding downstream 56094 22735125 ~ 22735385 (+)
G486127 NA other upstream 4360 22674242 ~ 22674452 (+)
G485780 NA other upstream 234193 22441316 ~ 22444619 (+)
G484726 NA other upstream 1124715 21553732 ~ 21554097 (+)
G484674 NA other upstream 1211907 21464139 ~ 21466905 (+)
LOC110525116 adamtsl2 other upstream 1715486 20958755 ~ 20984618 (+)
LOC110525518 LOC106585474 other downstream 511601 23079630 ~ 23197514 (+)
G487078 LOC106585486 other downstream 849709 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 974089 23653120 ~ 23667927 (+)
LOC110525563 LOC106585507 other downstream 1232790 23911741 ~ 23914297 (+)
G488049 NA other downstream 1900930 24579961 ~ 24586313 (+)

Expression


Co-expression Network