Gene
RNA
| Item | Value |
|---|---|
| gene id | G486143 |
| gene name | LOC106585459 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 22735125 ~ 22735385 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| stromelysin-3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552502 | False | 261 | lncRNA | 0.54 | 1 | 22735125 | 22735385 |
| TU552499 | True | 248 | lncRNA | 0.54 | 1 | 22735138 | 22735385 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525510 | LOC106585458 | coding | upstream | 7962 | 22721634 ~ 22727163 (+) |
| LOC110525507 | LOC106585456 | coding | upstream | 13798 | 22692800 ~ 22721327 (+) |
| LOC110525503 | LOC106585452 | coding | upstream | 78742 | 22646328 ~ 22656383 (+) |
| LOC110525504 | LOC106585454 | coding | upstream | 90232 | 22640897 ~ 22644893 (+) |
| LOC110525502 | zdh12 | coding | upstream | 107101 | 22626044 ~ 22628024 (+) |
| gstt1a | LOC106585460 | coding | downstream | 18884 | 22754269 ~ 22757520 (+) |
| LOC110525512 | LOC106585461 | coding | downstream | 24056 | 22759441 ~ 22766009 (+) |
| LOC110525516 | LOC106585462 | coding | downstream | 41541 | 22776022 ~ 22781759 (+) |
| LOC118964854 | LOC106585477 | coding | downstream | 75336 | 22810721 ~ 22814092 (+) |
| LOC118964852 | LOC106585477 | coding | downstream | 82939 | 22818324 ~ 22823007 (+) |
| G486142 | LOC106585459 | non-coding | upstream | 910 | 22733473 ~ 22734215 (+) |
| G486141 | LOC103361053 | non-coding | upstream | 1834 | 22732700 ~ 22733291 (+) |
| G486115 | LOC106585459 | non-coding | upstream | 2517 | 22732364 ~ 22732608 (+) |
| G486111 | NA | non-coding | upstream | 2922 | 22730990 ~ 22732203 (+) |
| G486129 | NA | non-coding | upstream | 56094 | 22678812 ~ 22679031 (+) |
| G486147 | LOC106582599 | non-coding | downstream | 4311 | 22739696 ~ 22739927 (+) |
| G486150 | NA | non-coding | downstream | 8451 | 22743836 ~ 22744437 (+) |
| G486151 | NA | non-coding | downstream | 9267 | 22744652 ~ 22745017 (+) |
| G486154 | NA | non-coding | downstream | 10877 | 22746262 ~ 22746670 (+) |
| G486159 | NA | non-coding | downstream | 15528 | 22750913 ~ 22751124 (+) |
| G486127 | NA | other | upstream | 60673 | 22674242 ~ 22674452 (+) |
| G485780 | NA | other | upstream | 290506 | 22441316 ~ 22444619 (+) |
| G484726 | NA | other | upstream | 1181028 | 21553732 ~ 21554097 (+) |
| G484674 | NA | other | upstream | 1268220 | 21464139 ~ 21466905 (+) |
| LOC110525116 | adamtsl2 | other | upstream | 1771799 | 20958755 ~ 20984618 (+) |
| LOC110525518 | LOC106585474 | other | downstream | 455247 | 23079630 ~ 23197514 (+) |
| G487078 | LOC106585486 | other | downstream | 793355 | 23528740 ~ 23531799 (+) |
| G487146 | LOC106585492 | other | downstream | 917735 | 23653120 ~ 23667927 (+) |
| LOC110525563 | LOC106585507 | other | downstream | 1176436 | 23911741 ~ 23914297 (+) |
| G488049 | NA | other | downstream | 1844576 | 24579961 ~ 24586313 (+) |
