Gene
RNA
| Item | Value |
|---|---|
| gene id | G486312 |
| gene name | LOC107567955 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 23062736 ~ 23064014 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552717 | True | 684 | lncRNA | 0.45 | 3 | 23062736 | 23064014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525533 | LOC106931442 | coding | upstream | 55424 | 23002738 ~ 23007312 (+) |
| LOC110525525 | LOC106585469 | coding | upstream | 70551 | 22960885 ~ 22992185 (+) |
| ift81 | LOC106585468 | coding | upstream | 105647 | 22935408 ~ 22957089 (+) |
| LOC118964853 | LOC106585477 | coding | upstream | 230980 | 22827083 ~ 22831756 (+) |
| LOC118964852 | LOC106585477 | coding | upstream | 239729 | 22818324 ~ 22823007 (+) |
| LOC110525518 | LOC106585474 | coding | downstream | 15616 | 23079630 ~ 23197514 (+) |
| LOC110525520 | LOC106585478 | coding | downstream | 134104 | 23181353 ~ 23227167 (+) |
| LOC110525581 | LOC106585477 | coding | downstream | 241567 | 23305581 ~ 23313220 (+) |
| LOC118964855 | LOC106585477 | coding | downstream | 248027 | 23312041 ~ 23320121 (+) |
| LOC110525161 | bicdl1 | coding | downstream | 295063 | 23359077 ~ 23392808 (+) |
| G486313 | LOC105902522 | non-coding | upstream | 384 | 23060989 ~ 23062352 (+) |
| G486246 | NA | non-coding | upstream | 108786 | 22952653 ~ 22953950 (+) |
| LOC110525516 | LOC106585462 | non-coding | upstream | 285661 | 22776022 ~ 22781759 (+) |
| G486159 | NA | non-coding | upstream | 311612 | 22750913 ~ 22751124 (+) |
| G486154 | NA | non-coding | upstream | 316066 | 22746262 ~ 22746670 (+) |
| G486411 | NA | non-coding | downstream | 187556 | 23251570 ~ 23260565 (+) |
| G486492 | NA | non-coding | downstream | 286683 | 23350697 ~ 23351177 (+) |
| G486493 | NA | non-coding | downstream | 287357 | 23351371 ~ 23351732 (+) |
| G486127 | NA | other | upstream | 388284 | 22674242 ~ 22674452 (+) |
| G485780 | NA | other | upstream | 618117 | 22441316 ~ 22444619 (+) |
| G484726 | NA | other | upstream | 1508639 | 21553732 ~ 21554097 (+) |
| G484674 | NA | other | upstream | 1595831 | 21464139 ~ 21466905 (+) |
| LOC110525116 | adamtsl2 | other | upstream | 2099410 | 20958755 ~ 20984618 (+) |
| G487078 | LOC106585486 | other | downstream | 464726 | 23528740 ~ 23531799 (+) |
| G487146 | LOC106585492 | other | downstream | 589106 | 23653120 ~ 23667927 (+) |
| LOC110525563 | LOC106585507 | other | downstream | 847807 | 23911741 ~ 23914297 (+) |
| G488049 | NA | other | downstream | 1515947 | 24579961 ~ 24586313 (+) |
