Gene
RNA
| Item | Value |
|---|---|
| gene id | G486411 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 23251570 ~ 23260565 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552825 | False | 265 | lncRNA | 0.50 | 2 | 23251570 | 23252499 |
| TU552827 | False | 554 | lncRNA | 0.50 | 4 | 23251570 | 23260565 |
| TU552829 | True | 223 | lncRNA | 0.49 | 2 | 23254872 | 23255501 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525520 | LOC106585478 | coding | upstream | 25784 | 23181353 ~ 23227167 (+) |
| LOC110525518 | LOC106585474 | coding | upstream | 54056 | 23079630 ~ 23197514 (+) |
| LOC110525533 | LOC106931442 | coding | upstream | 244258 | 23002738 ~ 23007312 (+) |
| LOC110525525 | LOC106585469 | coding | upstream | 259385 | 22960885 ~ 22992185 (+) |
| ift81 | LOC106585468 | coding | upstream | 294481 | 22935408 ~ 22957089 (+) |
| LOC110525581 | LOC106585477 | coding | downstream | 45016 | 23305581 ~ 23313220 (+) |
| LOC118964855 | LOC106585477 | coding | downstream | 51476 | 23312041 ~ 23320121 (+) |
| LOC110525161 | bicdl1 | coding | downstream | 98512 | 23359077 ~ 23392808 (+) |
| LOC110525542 | NA | coding | downstream | 300333 | 23560898 ~ 23570652 (+) |
| asgrl1 | LOC106585488 | coding | downstream | 335647 | 23596212 ~ 23606381 (+) |
| G486312 | LOC107567955 | non-coding | upstream | 187556 | 23062736 ~ 23064014 (+) |
| G486313 | LOC105902522 | non-coding | upstream | 189218 | 23060989 ~ 23062352 (+) |
| G486246 | NA | non-coding | upstream | 297620 | 22952653 ~ 22953950 (+) |
| LOC110525516 | LOC106585462 | non-coding | upstream | 474495 | 22776022 ~ 22781759 (+) |
| G486492 | NA | non-coding | downstream | 90132 | 23350697 ~ 23351177 (+) |
| G486493 | NA | non-coding | downstream | 90806 | 23351371 ~ 23351732 (+) |
| G486497 | NA | non-coding | downstream | 96302 | 23356867 ~ 23357387 (+) |
| G486499 | NA | non-coding | downstream | 103969 | 23364534 ~ 23364761 (+) |
| G486127 | NA | other | upstream | 577118 | 22674242 ~ 22674452 (+) |
| G485780 | NA | other | upstream | 806951 | 22441316 ~ 22444619 (+) |
| G484726 | NA | other | upstream | 1697473 | 21553732 ~ 21554097 (+) |
| G484674 | NA | other | upstream | 1784665 | 21464139 ~ 21466905 (+) |
| G487078 | LOC106585486 | other | downstream | 268175 | 23528740 ~ 23531799 (+) |
| G487146 | LOC106585492 | other | downstream | 392555 | 23653120 ~ 23667927 (+) |
| LOC110525563 | LOC106585507 | other | downstream | 651256 | 23911741 ~ 23914297 (+) |
| G488049 | NA | other | downstream | 1319396 | 24579961 ~ 24586313 (+) |
| G488078 | NA | other | downstream | 1370404 | 24630969 ~ 24631396 (+) |
